| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3166 |
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| Symbol | rpsL |
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| ID | 4186655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3601790 |
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| End bp | 3602203 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638073154 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_679748 |
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| Protein GI | 110639539 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.935823 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTACTA TACAACAATT AGTAAGAAAA GGAAGAGAAC AACTTGTATT CAAGTCAAAG
TCTCCTGCTC TAGATTCCTG CCCACAAAGA AGGGGCGTAT GTACACGTGT GTACACTACA
ACACCAAAGA AACCAAACTC TGCGATGCGT AAAGTTGCGA GGGTGCGTTT AACAAACTCT
AAAGAGGTGA ATGCTTATAT TCCCGGAGAA GGCCACAACC TTCAGGAACA CAGTATTGTG
TTGATCCGAG GTGGTAGAGT AAAAGATCTT CCAGGTGTTC GTTACCACAT CGTTCGTGGA
GCATTAGATA CTGCCGGAGT AAACGGTAGA AAACAAAGTA GATCTAAATA CGGTGCTAAG
AGACCTAAAC CAGGCCAGGC TGCTGCAGCT CCTGCAAAAG GCAAGAAAAA ATAA
|
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| Protein sequence | MPTIQQLVRK GREQLVFKSK SPALDSCPQR RGVCTRVYTT TPKKPNSAMR KVARVRLTNS
KEVNAYIPGE GHNLQEHSIV LIRGGRVKDL PGVRYHIVRG ALDTAGVNGR KQSRSKYGAK
RPKPGQAAAA PAKGKKK
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