Gene CHU_3164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3164 
SymbolfusA 
ID4186653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3599191 
End bp3601296 
Gene Length2106 bp 
Protein Length701 aa 
Translation table11 
GC content39% 
IMG OID638073152 
Productelongation factor G 
Protein accessionYP_679746 
Protein GI110639537 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.830301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGCG ATTTAAAATT CACACGAAAT ATTGGTATTG CCGCTCACAT TGATGCTGGT 
AAAACTACAA CTACTGAACG TATTCTTTAC TATGCTGGTG TAAACCACAA AATCGGTGAA
GTACACGAAG GTGGAGCAAC AATGGACTGG ATGGCTCAAG AGCAAGAAAG AGGTATCACG
ATTACTTCTG CTGCCACTAC AGTTGGTTGG AAATACAGAG ATAACCAATA TCACGTAAAT
ATTATTGATA CTCCAGGTCA CGTGGATTTT ACTGTAGAAG TAAACAGATC ATTACGTGTA
CTTGACGGTT TAGTATTCTT ATTCAGTGCG GTTGATGGTG TTGAACCACA ATCTGAAACA
AACTGGCGTT TAGCCAACAA CTACAAAGTA GCCAGATTAG GTTTCGTTAA TAAAATGGAC
CGTTCCGGTG CTGACTTCTT AAACGTATGT AAGCAGGTTA AAGAAATGTT AGGCAGCAAT
GCTGTTCCAT TGCAATTACC GATCGGTTCT GAAGATAATT TTCAAGGTGT TGTTGACTTA
GTTAACAACA GAGCAATCGT TTGGAATGAA GCTGACAAAG GTATGACTTT CACGGAAGTG
CCTATTCCAG CTGATATGGT TGATGAGACA CTTGAGTACA GAGAGAAATT ATTAGAAGCA
GTAGCTGATT ATGATGAGAC TTTGATGGAG AAATTCTTCG AAGATCCAAA TTCAATCTCG
GAAACTGAAA TATTAACAGC ATTGCGTAAA GCTGTTTTAG ATATGAAAAT CGTTCCTATG
TTGTGCGGTT CTTCATTCAA AAACAAAGGT GTTCAAACCA TGCTTGATTA TGTAATGGAG
TTGTTACCTT CTCCGTTAGA TAAAGATGAT CTAGTAGGAA TTAATCCTGA TACAGATAAA
GAAGTTGTGC GTAAGCCGGT TGAAACAGAT CCATTCTGTG CATTAGCTTT CAAAATTGCA
ACAGATCCAT TTGTAGGCCG TCTATGTTTC GTAAGATCAT ATTCAGGTCT ATTGGAATCA
GGTTCATATG TTTACAACAC ACGTTCCGGA AATAAAGAGC GAATTTCTCG TATTTTCCAG
ATGCATGCCA ACAAGCAAAA TCAAATTGAC AGATTACACT GTGGAGATAT TGGAGCTGTA
GTAGGTTTCA AAGATATCAA AACAGGTGAT ACATTGTGTG ACGAGAAAAA CAAAATCATC
CTTGAATCAA TGGTATTCCC AGAGCCGGTT ATCGGTTATG CGATTGAGCC AAAGACACAG
GCAGATGTTG ATAAAATGGG TGTTGCTATC GCTAAATTGG TAGAAGAAGA TCCAACGTTA
CACGTGCATA CAGATCAGGA AACTGGTCAG ACAATCCTTA GAGGTATGGG TGAATTACAC
CTTGAAATTA TCATCGATCG TATGAGACGT GAATTCAAGG TTGAAATTAA CCAGGGTGCT
CCTCAGGTTG CTTACAAAGA GTCGTTAACT AAAAGCACTG AACACCGTGA AGTTTTCAAA
AAACAATCGG GTGGTCGTGG TAAGTTCGCA GATATCGTAT TCGAATTATC TCCGCGTGAA
GATGATAAAT TAGGCCTTGA ATTTGAGAAT AAAATTGTTG GTGGTGTAAT TCCAAAAGAA
TTTATTCCTT CTATTCAAAA AGGCTTTGAA GAAGCAATGA AAAATGGCGT AATCGCTGGT
TTCCCTGTGG AATCAATGAA AGTACGTTTA AATCATGGTT CATTCCACGA TGTCGATTCA
GATGCATTGT CATTTGAATT GGCAGCAAGA CAAGGTTTCA AAGAAGCAGC TAAAAATGCA
GGTGCTAAAA TCATGGAACC GATCATGTCT GTTGAAGTTG TTACTCCTGA AGAATACACT
GGTCCTGTAA CAGGTGACTT GAACAGAAGA AGAGGTATGA TGAAGGGGAT GGATTCTAAA
ATGGGTGCTC AGGTTATCAA AGCTGACGTT CCATTGTCTG AACTATTCGG TTATGTGACT
GACTTAAGAA CAATCTCTTC TGGTCGTGCA ACTGCTTCAT TGACATTCTC TCATTATGAA
TTCGTTCCTG CAAACCTTGC AGAAACTATA GTAGCTAAAG TTAAAGGTAC TGCTGTAAGC
AAATAA
 
Protein sequence
MARDLKFTRN IGIAAHIDAG KTTTTERILY YAGVNHKIGE VHEGGATMDW MAQEQERGIT 
ITSAATTVGW KYRDNQYHVN IIDTPGHVDF TVEVNRSLRV LDGLVFLFSA VDGVEPQSET
NWRLANNYKV ARLGFVNKMD RSGADFLNVC KQVKEMLGSN AVPLQLPIGS EDNFQGVVDL
VNNRAIVWNE ADKGMTFTEV PIPADMVDET LEYREKLLEA VADYDETLME KFFEDPNSIS
ETEILTALRK AVLDMKIVPM LCGSSFKNKG VQTMLDYVME LLPSPLDKDD LVGINPDTDK
EVVRKPVETD PFCALAFKIA TDPFVGRLCF VRSYSGLLES GSYVYNTRSG NKERISRIFQ
MHANKQNQID RLHCGDIGAV VGFKDIKTGD TLCDEKNKII LESMVFPEPV IGYAIEPKTQ
ADVDKMGVAI AKLVEEDPTL HVHTDQETGQ TILRGMGELH LEIIIDRMRR EFKVEINQGA
PQVAYKESLT KSTEHREVFK KQSGGRGKFA DIVFELSPRE DDKLGLEFEN KIVGGVIPKE
FIPSIQKGFE EAMKNGVIAG FPVESMKVRL NHGSFHDVDS DALSFELAAR QGFKEAAKNA
GAKIMEPIMS VEVVTPEEYT GPVTGDLNRR RGMMKGMDSK MGAQVIKADV PLSELFGYVT
DLRTISSGRA TASLTFSHYE FVPANLAETI VAKVKGTAVS K