Gene CHU_3163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3163 
SymbolrpsJ 
ID4186652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3598881 
End bp3599186 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content36% 
IMG OID638073151 
Product30S ribosomal protein S10 
Protein accessionYP_679745 
Protein GI110639536 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.547346 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAA AAATCAGAAT AAAACTTAAA TCTTACGATC ACAATTTGGT TGATAAATCT 
TCCGAAAGAA TTGTAAGAGC TGTTAAGGCT ACCGGGGCTG TTGTTAGTGG TCCAATTCCT
TTGCCAACAG AAAAAGAGAT CTTCACCGTT TTGAGATCTC CACACGTTAA CAAGAAATCC
AGAGATCAGT ACCAGCTTTG TACATACAAA AGATTGGTTG ATATCTACTC TACAAGTTCT
AAAACAGTGG ATGCTCTAAT GAAATTAGAG TTGCCAAGTG GTGTAGACGT AGAAATCAAA
GTTTGA
 
Protein sequence
MNQKIRIKLK SYDHNLVDKS SERIVRAVKA TGAVVSGPIP LPTEKEIFTV LRSPHVNKKS 
RDQYQLCTYK RLVDIYSTSS KTVDALMKLE LPSGVDVEIK V