Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3162 |
Symbol | rplC |
ID | 4186651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3598067 |
End bp | 3598687 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638073150 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_679744 |
Protein GI | 110639535 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.596382 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGGTA TTATAGGTAA AAAAGTAGGG ATGACAAGCG TATATGATGC AGTAGGGAAT TATGTTCCTT GTACTGTAAT CGAAGCTGGT CCTTGCGTTA TCACGCAAAT CAAAACTGTA GAAACAGACG GTTACAAAGC TGTTCAGTTA GCTTTCGATG ATAAAAAAGA AAAGAGCACG ACTAAGCCTC TTTTGGGTCA TTTCAAAAAA GCAGGTGTTT CTCCAAAAAG AAAGCTTGTT GAATTCAAAG GTTTTGAAAA TGAATTGACT CTTGGTCAAT CTTTAGCAGC ACAAGACGTA TTCGTAGAAG GTGACTTCGT GGATGTAGTT GGTACTGCAA AAGGTAGAGG TTTCCAAGGT GTTGTAAAAA GACATGGTTT TGGTGGTGTG GGTGGTCAAA CTCACGGTCA GCATAACAGA GCTCGTCACG CTGGTTCAAT TGGTGCATGT TCTTTCCCTG CACGTGTATT TAAAGGTACT CGTATGGCTG GTAGAATGGG CAACAACAGA GTTAAAATTC AGAATTTACA AATTTTGAAA GTTTATCCTG AGCACAACTT ATTAGTTGTT AGTGGTTCTG TACCAGGTTC TAAAAATTCT TACGTTTTAA TTGAGAAGTA A
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Protein sequence | MSGIIGKKVG MTSVYDAVGN YVPCTVIEAG PCVITQIKTV ETDGYKAVQL AFDDKKEKST TKPLLGHFKK AGVSPKRKLV EFKGFENELT LGQSLAAQDV FVEGDFVDVV GTAKGRGFQG VVKRHGFGGV GGQTHGQHNR ARHAGSIGAC SFPARVFKGT RMAGRMGNNR VKIQNLQILK VYPEHNLLVV SGSVPGSKNS YVLIEK
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