Gene CHU_3160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3160 
SymbolrplW 
ID4186649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3597142 
End bp3597429 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content36% 
IMG OID638073148 
Product50S ribosomal protein L23 
Protein accessionYP_679742 
Protein GI110639533 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0089] Ribosomal protein L23 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.581688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATTT TAAAGAAACC ACTTATTACC GAAAAGGTAT CTGCACAGAA TGAAGGTGGA 
GTATACGGCT TTGTTGTAGA TAAAAATGCA AACAAAGTTG CCATCAAACA AGCAGTTGAA
AAAATGTACG GCGTCAATGT TGAAGAAGTA AGAACCATGA TCGCTCCTGG TAAAAAGAAG
ACCCGCTATA GCAAAGGTTC ATTCTTATCC GGAAAGACAT CTTCATTCAA AAAGGCAATC
GTAAAAGTTA AAGACGGAGA AATCATAGAT TTCTACGGTA ATCTATAA
 
Protein sequence
MSILKKPLIT EKVSAQNEGG VYGFVVDKNA NKVAIKQAVE KMYGVNVEEV RTMIAPGKKK 
TRYSKGSFLS GKTSSFKKAI VKVKDGEIID FYGNL