Gene CHU_3150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3150 
SymbolrplE 
ID4183628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3592459 
End bp3593013 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content36% 
IMG OID638073138 
Product50S ribosomal protein L5 
Protein accessionYP_679732 
Protein GI110639523 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.624164 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAATC CTAGATTAAA AGATAAATAT CTTAATGATA TTCTTCCGGA ACTAAAGAAG 
AAGTTTCAGT ACTCTTCCGT TATGCAAGTT CCTAAGATTA CAAAGATTGT AATCAATAAA
GGTATTGGTG CAGCTGTAGC TGACAAGAAA TTAGTTGATG TAGGTGTTGA TGAACTTACA
TTGATCTCTG GTCAGAAAGC AGTAGCTACT AAATCAAAGT TAGATGTTTC TAACTTCAAA
CTTAGAGCTA ATATGCCAAT CGGTGCTAAA GTTACGTTAA GAGGTAATCA CATGTATGAG
TTCCTTGACC GTTTAACGGC AGTGGCTTTA CCACGTGTGC GTGATTTCAA AGGTATCAAC
GATAAAGGTT TTGACGGTCG TGGAAATTAC ACATTAGGTG TAAAAGAACA GATCATTTTC
CCTGAAATCA GCATTGATAA AATAAATAAA ATTACTGGTA TGGACATCAC GATCGTGACT
ACTGCCAATA CAGACGAAGA AAGTTTTGAA CTTCTGAAAG CATTCGGTAT GCCGTTTGCA
TCTCTGAAAA AATAA
 
Protein sequence
MANPRLKDKY LNDILPELKK KFQYSSVMQV PKITKIVINK GIGAAVADKK LVDVGVDELT 
LISGQKAVAT KSKLDVSNFK LRANMPIGAK VTLRGNHMYE FLDRLTAVAL PRVRDFKGIN
DKGFDGRGNY TLGVKEQIIF PEISIDKINK ITGMDITIVT TANTDEESFE LLKAFGMPFA
SLKK