Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3150 |
Symbol | rplE |
ID | 4183628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3592459 |
End bp | 3593013 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638073138 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_679732 |
Protein GI | 110639523 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.624164 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAATC CTAGATTAAA AGATAAATAT CTTAATGATA TTCTTCCGGA ACTAAAGAAG AAGTTTCAGT ACTCTTCCGT TATGCAAGTT CCTAAGATTA CAAAGATTGT AATCAATAAA GGTATTGGTG CAGCTGTAGC TGACAAGAAA TTAGTTGATG TAGGTGTTGA TGAACTTACA TTGATCTCTG GTCAGAAAGC AGTAGCTACT AAATCAAAGT TAGATGTTTC TAACTTCAAA CTTAGAGCTA ATATGCCAAT CGGTGCTAAA GTTACGTTAA GAGGTAATCA CATGTATGAG TTCCTTGACC GTTTAACGGC AGTGGCTTTA CCACGTGTGC GTGATTTCAA AGGTATCAAC GATAAAGGTT TTGACGGTCG TGGAAATTAC ACATTAGGTG TAAAAGAACA GATCATTTTC CCTGAAATCA GCATTGATAA AATAAATAAA ATTACTGGTA TGGACATCAC GATCGTGACT ACTGCCAATA CAGACGAAGA AAGTTTTGAA CTTCTGAAAG CATTCGGTAT GCCGTTTGCA TCTCTGAAAA AATAA
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Protein sequence | MANPRLKDKY LNDILPELKK KFQYSSVMQV PKITKIVINK GIGAAVADKK LVDVGVDELT LISGQKAVAT KSKLDVSNFK LRANMPIGAK VTLRGNHMYE FLDRLTAVAL PRVRDFKGIN DKGFDGRGNY TLGVKEQIIF PEISIDKINK ITGMDITIVT TANTDEESFE LLKAFGMPFA SLKK
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