| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3142 |
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| Symbol | secY |
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| ID | 4183620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3588242 |
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| End bp | 3589564 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638073130 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_679724 |
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| Protein GI | 110639515 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0487569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.382691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCGTT TCATTACTAC TTTTAAGAAT ATATTCTCAA TAGAAGAACT TCGTACGAGA
ATCTTCACAA CGATAATGTT CCTAGTTATG TTCAGACTAG GTTCTTTTGT TGTTTTACCA
GGTGTAGACC CGAGTAAAAT TACTGAAGGT ACGAATACTA GCGGAATATT AGGTGTTATT
AATACTTTCT CCGGCGGTGC ATTCAATAAC GTATCCGTAT TTGGATTAGG TATCATGCCG
TACATCTCGG CTTCAATTGT TCTTCAATTA TTGACCTTTG CAGTTCCATA TTTTCAACGT
TTACAAAAAG ACGGTGAATC AGGAAGAAAG ACAATAAACC AGTATACAAG AATTTTAACA
ATTTTCATTA CAGTTGCTCA ATCAATAGGT TATTTAGCGG CAACATTAGA TGAAGGTATG
ATTTATGAAG GAATGAATAC ACCTTTCATG AATGTAGTTA GAATTGTTAC ATTGATTTCC
GGAACTATGT TCTGTATGTG GATCGGTGAG CGTATAACTG AAAAAGGAAT TGGCAATGGT
ATTTCAATGT TGATCATGAT TGGTATTGTT TCAAGATTAC CATTCGCATT AATGGCTGAA
GTATCATCTA AAAATCTTGA AGGTGCATTA CCATTACTAA TAGAATTTGC AGCTTTATTT
GCAGTAATCA TGCTGGTAGT TCTTGTGCAG CAGGCTACGC GGAGAATACC AATTCAATAT
ACCAAACAAA TTGCCGGAGG TAAGCAGGTA ATTGGTCAAC GTCAATATTT ACCGTTGAAA
TTGATTGCTG CAGGCGTTAT GCCGATTATC TTTGCTCAAT CTGTGATGTT CCTTCCTGCA
ATTATCGGAT CTTCATTTCC TGATTCGGAA TTTGCAACAA CGATTGGTTC AACAATGAGT
GATTTCACTT CCTGGCAATA CAATGTTGCT TTTGCAACAA TGATCATATT GTTTACTTAT
TTCTATACAG CAATCACGGT TAATCCGAAT TCAATTGCTG AAGATTTAAG AAGAAACGGG
GGATTTATTC CTAGTGTTAA GCCAGGTCTT GCGACATCAG AGTATATTGA TGATGTACTT
ACAAAAATAA CATTGCCTGG ATCTATATTT CTTGCTCTTT TAGCAATCTT ACCTGCTTTT
GCAAGTATGA CTGGAATTGA AAAGGAATTT GCATATTTCT ACGGCGGTAC TTCTTTGTTG
ATTATGATTG GTGTTGTGCT TGACACACTT CAGCAAATCG AAAGCTTCTT ATTGATGAAG
CATTACGATG GAATGATGCA AACCGGTCGT GTTAAAGGAA GATTAGATAC AGCTGCTGTT
TAA
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| Protein sequence | MKRFITTFKN IFSIEELRTR IFTTIMFLVM FRLGSFVVLP GVDPSKITEG TNTSGILGVI
NTFSGGAFNN VSVFGLGIMP YISASIVLQL LTFAVPYFQR LQKDGESGRK TINQYTRILT
IFITVAQSIG YLAATLDEGM IYEGMNTPFM NVVRIVTLIS GTMFCMWIGE RITEKGIGNG
ISMLIMIGIV SRLPFALMAE VSSKNLEGAL PLLIEFAALF AVIMLVVLVQ QATRRIPIQY
TKQIAGGKQV IGQRQYLPLK LIAAGVMPII FAQSVMFLPA IIGSSFPDSE FATTIGSTMS
DFTSWQYNVA FATMIILFTY FYTAITVNPN SIAEDLRRNG GFIPSVKPGL ATSEYIDDVL
TKITLPGSIF LALLAILPAF ASMTGIEKEF AYFYGGTSLL IMIGVVLDTL QQIESFLLMK
HYDGMMQTGR VKGRLDTAAV
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