| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3138 |
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| Symbol | rpsK |
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| ID | 4183616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3586250 |
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| End bp | 3586657 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638073126 |
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| Product | 30S ribosomal protein S11 |
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| Protein accession | YP_679720 |
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| Protein GI | 110639511 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0100] Ribosomal protein S11 |
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| TIGRFAM ID | [TIGR03632] 30S ribosomal protein S11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0205896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.555314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCAAC AATCAACTGC CGCGAAAAGA AAAGATAAAG CTAAAAAAAG AATCGTAGTT
ATCGAACCTA CAGGTCAGGT TCATATCAGA GCTTCTTTTA ACAACATTAT CATTTCTGTT
ACCAATAGTA CAGGTCAAGT AATATCTTGG GCTTCTGCTG GTAAAATGGG ATTCCGCGGA
TCTAAAAAGA ATACTCCTTA CGCTGCTCAG GTTGCAGCGC AAAACTGTGC TCAGGTTGCC
TTTGAAGGCG GAATGAGAAA GTGTGAAGTT TTTGTAAAAG GACCAGGCTC AGGTAGAGAG
TCTGCAATTC GCACCATCCA AAATGCAGGT ATCGAAGTGT TAACGATTAA AGACGTTACG
CCTATGCCAC ATAACGGATG CAGACCTCCT AAAAAGAGAA GAGTCTAA
|
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| Protein sequence | MAQQSTAAKR KDKAKKRIVV IEPTGQVHIR ASFNNIIISV TNSTGQVISW ASAGKMGFRG
SKKNTPYAAQ VAAQNCAQVA FEGGMRKCEV FVKGPGSGRE SAIRTIQNAG IEVLTIKDVT
PMPHNGCRPP KKRRV
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