| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3137 |
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| Symbol | rpsD |
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| ID | 4183615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3585607 |
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| End bp | 3586212 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638073125 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_679719 |
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| Protein GI | 110639510 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0424686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.56438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACGTT ATACTGGCCC AAGGTCTAGA ATATCAAGAA GATTCGGTGA GCCTGTGATG
GGGGATAGCA AAGCGCTTCA AAAGAAGAAC TATGCGCCTG GAATGCACGG TAGAAATAAA
AAAAGAAAGC AATCTGAATA TTCTATTCAG TTAAAAGAAA AGCAAAAAGC TAAATATACT
TATGGTGTAT TAGAAAGACA ATTTGCTAAA ACTTTTGACA CTGCAGCAAG AAAACAAGGT
ATCACTGGTG AAAACCTTTT GAAAATGCTT GAAGCTCGTT TAGATAATAC AGTTTACCGT
TTAGGTATTG CTTCATCAAG AAGAGCTGCT CGTCAACTTG TAATTCACAA ACATATTGTG
GTGAACGGTG ATGTTGTAAA CATTCCTTCA TACCAATTGA AACCTGGCGA TCAGTTAGGT
GTTCGTGAGA AATCAAAATC AATCGAAGCA ATAACAGATA GTCTTTCTAC TCAATCAGCT
AAGAAATTTA CCTGGTTAGA GTGGGATCAA TCAAGCATGT TAGGTAAATT TGTAACTTAC
CCTCAGCGTG AAGAAATTCC TGAAAACATC CAGGAACAAC TGATTGTCGA GTTGTACTCT
AAATAA
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| Protein sequence | MARYTGPRSR ISRRFGEPVM GDSKALQKKN YAPGMHGRNK KRKQSEYSIQ LKEKQKAKYT
YGVLERQFAK TFDTAARKQG ITGENLLKML EARLDNTVYR LGIASSRRAA RQLVIHKHIV
VNGDVVNIPS YQLKPGDQLG VREKSKSIEA ITDSLSTQSA KKFTWLEWDQ SSMLGKFVTY
PQREEIPENI QEQLIVELYS K
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