| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3123 |
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| Symbol | clpB |
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| ID | 4186804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3568996 |
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| End bp | 3571611 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638073111 |
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| Product | heat shock protein |
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| Protein accession | YP_679705 |
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| Protein GI | 110639496 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.226361 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTA ATAATTACAC GATTAAAGGG CAGGAGGCAT TTCAGAAAGC GATGGAAATT
GTTGCTGCCA ACGAACAGCA ATCCATTGAA TCTGTTCACT TATTGAAAGG AATAATCGTT
GCGGATGAAA ACGTGGTTCC TTTTTTATTC AAAAAAAATA ATATCAATCC GGTTACGTTT
AATCAGACAT TGGATGCCGT AATTAAAACC TACGGTAAAG TTTCCGGAGG CAGTCCGTAT
TTGTCAAACG ATGCCACGCA GGTATTAAAT AAAGCTACGG CTTTATCAAA AGAGTTTGGC
GACGAATATA TTTCGATCGA GCACATGTTG CTTGCATTGG TTTCAGGGAA AGATAAGGCT
GCAACGTTAT TAAAAGATGC CGGCCTTTCG GAAAAGGGCT TGCGCGCTGC GATCCAGGAG
TTACGTGGTA CAAGTAAAGT AACCGATCAG CATGCGGAAG GTAAATACCG GTCGCTTGAA
AAATATTCTA AAAATTTAAA TGACCTGGCT CGTTCCGGAA AAATTGATCC GGTGATTGGC
CGGGATGAAG AGATCCGCAG AGTACTGCAG ATCTTATCCA GACGTACCAA AAATAATCCG
ATTTTATTGG GCGAGCCGGG CGTTGGTAAA ACAGCTATCG CTGAAGGCCT TGCACAGCGT
ATTGTTTCGG GTGATGTTCC TGAAAATTTA AAAAGCAAAC AATTAATCTC TCTGGATATG
GGTTTGCTGG TTGCAGGTGC AAAGTATAAA GGTGAATTTG AAGAGCGGTT GAAATCGGTG
ATCAAAGAAG TGATCGATTC AGATGGCGAG ATTGTGTTAT TCATTGATGA GATCCATACG
TTAATTGGTG CCGGCGGCGG GGAAGGTGCG ATGGATGCGG CAAACTTGCT GAAACCTGCA
CTTGCACGTG GTGAGCTGCA TGCAATCGGT GCAACAACCT TAAAAGAATA TCAGAAATAC
ATTGAAAAAG ATAAAGCGCT GGAACGTCGT TTCCAAGCGG TAATTGTTGA CGAGCCGAAT
ACACAGGATG CAATTTCTAT CCTTCGCGGG ATCAAAGAAA AATACGAAGT GCATCACGGA
ATCCGGATTC AGGATGATGC CATCATTGCT GCAGTAGAAC TTTCTCAACG CTATATCAGT
GATCGTTATT TGCCCGATAA AGCGATTGAT TTGATGGATG AAGCATCTGC TAAATTGCGT
ATCGAGCTTG ATTCTATGCC GCAGGAGCTG GATGAAATTC TTCGCCGTAT CATGCAGCTG
GAAATTGAAC GTGAAGCGAT CCGTAGAGAA AATAATAAAG AGAAGGAAAC GATTCTTTCC
CGTGAACTTG CAGAACTGAA TGAGCAGAAG AGCCAGATCA TGGCTAAGTG GCAGGAGGAA
AAACGTGTGA TCGATGGCTT GAAGCAAGCC AAGGAAGATA TCGACCGGTA CAAAATGGAA
GCCGAGCAAG CCGAACGTAA TGGTGATTAC GGTAAGGTTG CAGAGATCCG TTATGGTAAA
ATTCAGGAGT CTGAAAAGCA ATTGGTCGAA TTCAACAAGC AGCTGCAGGA GTTGAAACAA
ACACTTGGTT CTTCGATGCT GAAAGAAGAA GTGACGCCGG AAGATATTGC AGAAGTTGTT
GCGAAATGGA CAGGCATACC GGTTTCAAAA ATGCTTCAGA GTGAGAGAGA AAAGTTGCTT
CACTTAGAAG AAGAGTTAGG TAAACGTGTC GCCGGACAAG CGGAAGCGAT AGAGGCCATA
TCCGATGCGG TCCGTAGGAG CAGAGCAGGC TTACAGGATC CGAAGCGTCC GATAGGTTCT
TTTATTTTCT TAGGAACAAC AGGTGTTGGT AAAACCGAAC TGGCAAAAGC ACTGGCTGAT
TATTTATTCA ACGACGACAA TGCTATGGTA CGTATTGATA TGTCTGAATA TCAGGAAAGC
CATGCTGTAA GTCGCTTGGT TGGTGCACCT CCGGGATACA TCGGATATGA AGAAGGGGGA
CAATTAACGG AAGCTGTTCG ACGGAAGCCG TATTCAGTAA TTTTATTGGA TGAGATTGAA
AAGGCCCATC CGGATGTATT TAATATATTG CTTCAGGTAT TGGATGAAGG GCGCTTGACA
GATAATAAAG GCCGTGTAGC GAACTTTAAA AATGCAATCA TTATCATGAC ATCCAATATG
GGTGCGCATG TGATTCAGGA GAATTTTGAT AAGCTAACTG CTGCAAATGA AGATCAGGTA
GTTGAGGAAA CAAAAAATGA AGTAATTGAT TTATTACGTA AAACGATTCG GCCGGAGTTC
TTGAATCGTG TCGATGAAAT TATAATGTTC AGACCGCTGA CCCGAAAAGA GATTCGTAAG
ATTGTTGGTA TACAGTTTAG CTTGATCCAA AAACGTCTCG AAGAGAACGG AATCAAAGTT
GAGGCAAGTA CCGAAGTATT GGATAAATTG GGAGAGTTAG GTTTCGATCC GCAATTCGGT
GCACGTCCGT TGAAACGTGT CATGCAGCGT TTGATCCTGA ATGAATTGTC CAAAGAAATT
CTTTCCGGAA ACATTCAGAA AGAAAGTGTT GTAGGCATTA CGCTTGGTGA AGATGGGAAT
CTGCAGTTTT TGAACTTGGA TAGTGTACCG TTGTAA
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| Protein sequence | MNINNYTIKG QEAFQKAMEI VAANEQQSIE SVHLLKGIIV ADENVVPFLF KKNNINPVTF
NQTLDAVIKT YGKVSGGSPY LSNDATQVLN KATALSKEFG DEYISIEHML LALVSGKDKA
ATLLKDAGLS EKGLRAAIQE LRGTSKVTDQ HAEGKYRSLE KYSKNLNDLA RSGKIDPVIG
RDEEIRRVLQ ILSRRTKNNP ILLGEPGVGK TAIAEGLAQR IVSGDVPENL KSKQLISLDM
GLLVAGAKYK GEFEERLKSV IKEVIDSDGE IVLFIDEIHT LIGAGGGEGA MDAANLLKPA
LARGELHAIG ATTLKEYQKY IEKDKALERR FQAVIVDEPN TQDAISILRG IKEKYEVHHG
IRIQDDAIIA AVELSQRYIS DRYLPDKAID LMDEASAKLR IELDSMPQEL DEILRRIMQL
EIEREAIRRE NNKEKETILS RELAELNEQK SQIMAKWQEE KRVIDGLKQA KEDIDRYKME
AEQAERNGDY GKVAEIRYGK IQESEKQLVE FNKQLQELKQ TLGSSMLKEE VTPEDIAEVV
AKWTGIPVSK MLQSEREKLL HLEEELGKRV AGQAEAIEAI SDAVRRSRAG LQDPKRPIGS
FIFLGTTGVG KTELAKALAD YLFNDDNAMV RIDMSEYQES HAVSRLVGAP PGYIGYEEGG
QLTEAVRRKP YSVILLDEIE KAHPDVFNIL LQVLDEGRLT DNKGRVANFK NAIIIMTSNM
GAHVIQENFD KLTAANEDQV VEETKNEVID LLRKTIRPEF LNRVDEIIMF RPLTRKEIRK
IVGIQFSLIQ KRLEENGIKV EASTEVLDKL GELGFDPQFG ARPLKRVMQR LILNELSKEI
LSGNIQKESV VGITLGEDGN LQFLNLDSVP L
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