Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3106 |
Symbol | |
ID | 4186556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3546945 |
End bp | 3548732 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638073094 |
Product | hypothetical protein |
Protein accession | YP_679688 |
Protein GI | 110639479 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCATT TACCGGCTAT GAAAAGACAT TCCTATTTAT TTTTATTTTT GTTATTTATC CTAAGCCTGT TCAGTCAGGC GCAGCACTGG TCTACCGCAA CATTGAATGA AGGAAAAAAT AATATGAGTA CAGGGGCAAT CGGCCCCTAT GTATTCTTTT TTTCCGGCAA TAAATGGATC GGAAATACAC GTTATTTAGT GGGACAAATA GAAATGATTG ATATATGTAC CGGTACAAAA ATAACTACCG CATTGCCCAA TGATTCCATG CGATCCAGGG TTACATCGGT AAGTTACGGC AGCAAAATTT ATTTTGCCGG CGGTGTTGGT AACCTGAATG GTGGGAGCGG TTTGAATCCA ACTTTTTATA GTAAGCAGGT AGATATCTAT GATACCGTTA CGGGCCAATG GTCTGCACAA TACCTCTCAG AGGCCCGGGT TGATCTAGGA GCTGCAGCTG CCAATGGAAA AGTAGTATTC GGCGGGGGAG AGAAAAAAAC AAGCAGTACG GCACCATCAT ACATTGTCGA TTTCTATTCT ACGCAAACAA ATACCTGGAC GGCAGGAACA TTTTTGCCTG CACAAGGAGT GATACAACGC ACCAGGCTTA CAGGAGTTTC TTTTCAGAAC AAGATCTATT TTGCCGGCGG CTTAACGACG TCAGTTCCTA AAGATTTAAT CAATGTGTAT GACACGGAAA CCAATACCTG GCGCCGGGAT ACGTTAAAAG AGGCGAAATA CAACCTGAAA AGTTTTGTGT ACAAAGACGC CGTATATTTT GCCGGCGGAC AAGTAAGCGG ACTAATTCCA GCCGATACGA TAGAAATTTA CCGTCCGGCA AACGACAGCT GGGAGTACGT AAAAATTCCC TATTTTTTTA AAACCGTGCA GGATGGACGG GAACGGATTT ACAAAGAGGT TGTACAGGCC GGCTGCAAAG CATTTTTCAT TCCTTTTCCC GATGAATCTG GTCGGATTCC CAACATGCCG GAATTAAGCA GTGCAGACTC GGTAGCGGTC TATGACCTGG CCCGTAAAAA ATGGTCCTAC ATTGATCTTC CATCTAAAAA TATCGGGGTA ACCGCTGTTG CCACACAGAA CAAAGTATAT TTTGCCGGCG GGGCAGATTC AGCAACGGCC GTATTTTCAA ACATCATCGA CATCCTCACC CTGGAGCCCA AACTGCAGCT GGCTGTAGCA AACACGGCTG TAACAGCGTA TGATTTCGGC ATGGTAGAAA CGGGTGATCT TTCAACCGCC AGCGTAGCGG TAAGCAACGA AGGCGATTAC GATTTACTGT TTAAAGATCT TACCCAACGC ATCAGCATCA GCGGCGATGC AGCTGATTTC AGCATTGATC CGGGTATGCT GCAACTAACC GACACCCTGG AGCCCGCGGA GATCATTGCA TTACCTGTGA GCTTTCACCC AACCACAACA GGAACCAAAC AAATCACCCT TACAATAAAC AGCAATGACC CCAATACACC CGCCTATACG CTAACGGTAA CAGGTACCGC AACCGATATT CCAACATCCA TTCTGAATCG ATCCGAACAA AATATTGCCG TGTACCCCAA TCCAACCACC GGCATTTTGC ACATTGATTC GCAACAACCA GGTACGTTAA ACGTGCAGGT AACAAATCTT CAGGGGCAGA CCGTAAAAAA ACAAACCTTG ACCGATGACA CGGCTGGCCT TGATATATCT GCCCTTCCGG ATGGGTTTTA TGTAGTAAAA ATTACAGGCG ATCAATCATC GGCTGTTGTG AAAGTATTGA AGCAGTAG
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Protein sequence | MIHLPAMKRH SYLFLFLLFI LSLFSQAQHW STATLNEGKN NMSTGAIGPY VFFFSGNKWI GNTRYLVGQI EMIDICTGTK ITTALPNDSM RSRVTSVSYG SKIYFAGGVG NLNGGSGLNP TFYSKQVDIY DTVTGQWSAQ YLSEARVDLG AAAANGKVVF GGGEKKTSST APSYIVDFYS TQTNTWTAGT FLPAQGVIQR TRLTGVSFQN KIYFAGGLTT SVPKDLINVY DTETNTWRRD TLKEAKYNLK SFVYKDAVYF AGGQVSGLIP ADTIEIYRPA NDSWEYVKIP YFFKTVQDGR ERIYKEVVQA GCKAFFIPFP DESGRIPNMP ELSSADSVAV YDLARKKWSY IDLPSKNIGV TAVATQNKVY FAGGADSATA VFSNIIDILT LEPKLQLAVA NTAVTAYDFG MVETGDLSTA SVAVSNEGDY DLLFKDLTQR ISISGDAADF SIDPGMLQLT DTLEPAEIIA LPVSFHPTTT GTKQITLTIN SNDPNTPAYT LTVTGTATDI PTSILNRSEQ NIAVYPNPTT GILHIDSQQP GTLNVQVTNL QGQTVKKQTL TDDTAGLDIS ALPDGFYVVK ITGDQSSAVV KVLKQ
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