Gene CHU_3106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3106 
Symbol 
ID4186556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3546945 
End bp3548732 
Gene Length1788 bp 
Protein Length595 aa 
Translation table11 
GC content45% 
IMG OID638073094 
Producthypothetical protein 
Protein accessionYP_679688 
Protein GI110639479 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCATT TACCGGCTAT GAAAAGACAT TCCTATTTAT TTTTATTTTT GTTATTTATC 
CTAAGCCTGT TCAGTCAGGC GCAGCACTGG TCTACCGCAA CATTGAATGA AGGAAAAAAT
AATATGAGTA CAGGGGCAAT CGGCCCCTAT GTATTCTTTT TTTCCGGCAA TAAATGGATC
GGAAATACAC GTTATTTAGT GGGACAAATA GAAATGATTG ATATATGTAC CGGTACAAAA
ATAACTACCG CATTGCCCAA TGATTCCATG CGATCCAGGG TTACATCGGT AAGTTACGGC
AGCAAAATTT ATTTTGCCGG CGGTGTTGGT AACCTGAATG GTGGGAGCGG TTTGAATCCA
ACTTTTTATA GTAAGCAGGT AGATATCTAT GATACCGTTA CGGGCCAATG GTCTGCACAA
TACCTCTCAG AGGCCCGGGT TGATCTAGGA GCTGCAGCTG CCAATGGAAA AGTAGTATTC
GGCGGGGGAG AGAAAAAAAC AAGCAGTACG GCACCATCAT ACATTGTCGA TTTCTATTCT
ACGCAAACAA ATACCTGGAC GGCAGGAACA TTTTTGCCTG CACAAGGAGT GATACAACGC
ACCAGGCTTA CAGGAGTTTC TTTTCAGAAC AAGATCTATT TTGCCGGCGG CTTAACGACG
TCAGTTCCTA AAGATTTAAT CAATGTGTAT GACACGGAAA CCAATACCTG GCGCCGGGAT
ACGTTAAAAG AGGCGAAATA CAACCTGAAA AGTTTTGTGT ACAAAGACGC CGTATATTTT
GCCGGCGGAC AAGTAAGCGG ACTAATTCCA GCCGATACGA TAGAAATTTA CCGTCCGGCA
AACGACAGCT GGGAGTACGT AAAAATTCCC TATTTTTTTA AAACCGTGCA GGATGGACGG
GAACGGATTT ACAAAGAGGT TGTACAGGCC GGCTGCAAAG CATTTTTCAT TCCTTTTCCC
GATGAATCTG GTCGGATTCC CAACATGCCG GAATTAAGCA GTGCAGACTC GGTAGCGGTC
TATGACCTGG CCCGTAAAAA ATGGTCCTAC ATTGATCTTC CATCTAAAAA TATCGGGGTA
ACCGCTGTTG CCACACAGAA CAAAGTATAT TTTGCCGGCG GGGCAGATTC AGCAACGGCC
GTATTTTCAA ACATCATCGA CATCCTCACC CTGGAGCCCA AACTGCAGCT GGCTGTAGCA
AACACGGCTG TAACAGCGTA TGATTTCGGC ATGGTAGAAA CGGGTGATCT TTCAACCGCC
AGCGTAGCGG TAAGCAACGA AGGCGATTAC GATTTACTGT TTAAAGATCT TACCCAACGC
ATCAGCATCA GCGGCGATGC AGCTGATTTC AGCATTGATC CGGGTATGCT GCAACTAACC
GACACCCTGG AGCCCGCGGA GATCATTGCA TTACCTGTGA GCTTTCACCC AACCACAACA
GGAACCAAAC AAATCACCCT TACAATAAAC AGCAATGACC CCAATACACC CGCCTATACG
CTAACGGTAA CAGGTACCGC AACCGATATT CCAACATCCA TTCTGAATCG ATCCGAACAA
AATATTGCCG TGTACCCCAA TCCAACCACC GGCATTTTGC ACATTGATTC GCAACAACCA
GGTACGTTAA ACGTGCAGGT AACAAATCTT CAGGGGCAGA CCGTAAAAAA ACAAACCTTG
ACCGATGACA CGGCTGGCCT TGATATATCT GCCCTTCCGG ATGGGTTTTA TGTAGTAAAA
ATTACAGGCG ATCAATCATC GGCTGTTGTG AAAGTATTGA AGCAGTAG
 
Protein sequence
MIHLPAMKRH SYLFLFLLFI LSLFSQAQHW STATLNEGKN NMSTGAIGPY VFFFSGNKWI 
GNTRYLVGQI EMIDICTGTK ITTALPNDSM RSRVTSVSYG SKIYFAGGVG NLNGGSGLNP
TFYSKQVDIY DTVTGQWSAQ YLSEARVDLG AAAANGKVVF GGGEKKTSST APSYIVDFYS
TQTNTWTAGT FLPAQGVIQR TRLTGVSFQN KIYFAGGLTT SVPKDLINVY DTETNTWRRD
TLKEAKYNLK SFVYKDAVYF AGGQVSGLIP ADTIEIYRPA NDSWEYVKIP YFFKTVQDGR
ERIYKEVVQA GCKAFFIPFP DESGRIPNMP ELSSADSVAV YDLARKKWSY IDLPSKNIGV
TAVATQNKVY FAGGADSATA VFSNIIDILT LEPKLQLAVA NTAVTAYDFG MVETGDLSTA
SVAVSNEGDY DLLFKDLTQR ISISGDAADF SIDPGMLQLT DTLEPAEIIA LPVSFHPTTT
GTKQITLTIN SNDPNTPAYT LTVTGTATDI PTSILNRSEQ NIAVYPNPTT GILHIDSQQP
GTLNVQVTNL QGQTVKKQTL TDDTAGLDIS ALPDGFYVVK ITGDQSSAVV KVLKQ