Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3103 |
Symbol | |
ID | 4186553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3541883 |
End bp | 3543649 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638073091 |
Product | hypothetical protein |
Protein accession | YP_679685 |
Protein GI | 110639476 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.655604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA TCCTCATGCT GTTAACCGTT ATTTTTATGT TCACCCATGC CGCCTTTGCG CAGCACTGGT CTACCGCAAC GTTGAATGAA GGAAAAAACA ACATGAGTAC AGGGGCAATC GGCCCCTATC TATTCTTTTT TTCAGGAGAT AAATGGGTTG GTAACACATT GTATTTAGTG AGTCAGATAG AAATGATTGA TACACGTACC GGTGCAAAAC TAAGTACTGC CTTACCCAAT GATTCCATGC GATCCAGGGT TACATCCATA AGTTATGGCA GCAAAATTTA TTTTGCCGGT GGCGTTGGCA GATTGAATGG CCCCAGTCAA TTAAACCCGT CTTTTTACAG TAAGAAGGTA GATATCTATG ATACCCTTAC GGGCCAATGG TCTGCACAAT ACCTCTCAGA GGCCCGGGTT GATCTAGGAG CTGGTGCTGC CAATGGAAAA GTAGTATTCG GAGGGGGAGA GAAAAAAACA AGCAGTACGG CACCATCATA CATTGTCGAT TTCTATTCTA CGCAAACAAA TACCTGGACA GCAGGAACAT TTTTGCCTGC ACAAGGAATT GTACAACGCA CCAGGCTTAC AGGAGTTTCT TTTCAGAACA AAATCTATTT TGCCGGGGGA GAAACCAGCT CAGTTCCCAA AGATTTAATC AATGTGTATG ACACGGAACT AAATACATGG AGACGTGATA CACTCAAAGA AGCAAAATAC AACCTGAAAA GTTTTGTATA CAAAGATGCT ATTTATTTTG CGGGCGGGCA GGTGAGCAAT CTAATTCCAG CTGATACGAT AGAAATTTAC CGTCCGGCAA ACGACAGCTG GGAGTACGTA AAAATTCCCT ATTTTTTTAA AACCGTGCAG GATGGACGGG AACGGATTTA CAAGGAGGTT GTACAGGCCG GCTGCAAAGC ATTTTTTATT CCATTTCCAG ATCGTTCGGG TTGGATTCCC AACAAGCCGG AATTCAGCAG TGCAGACTCG GTAGCGGTCT ATGACCTGGC CCGTAAAAAA TGGTCCTACA TTGATCTTCC GTCTAAAAAT ATCGGTGTAA CCGCTGTTGC CACACAGAAC AAAGTATATT TTGCCGGCGG GGCAGATTCA GCAACGGCCG TATTTTCAAA CATCATCGAC ATCCTCACCC TTGAGCCCAA ACTGCAGCTG GCTGTAGCAA ACACGGCTGT AACAGCGTAT GATTTCGGCA TGGTAGAAAC GGGTGATCTT TCAACCGTCA GCGTAGCGGT AAGCAACGAA GGCGATTACG ATTTACTGTT TAAAGATCTT ACCCAACGCA TCAGCATCAG CGGCGATGCA GCTGATTTCA GCATTGATCA CGGTATGCTG CAACTAACCG ACACCCTGGA GCCCGCGGAG ATCATTGCAT TACCTGTGAG CTTTCACCCA ACCACAACAG GAACCAAACA AATCACCCTT ACAATAAACA GCAATGACCC CAATACACCC GCCTATACGC TAACGGTAAC AGGTACCGCA ACCGATATTC CAACATCCAT TCTGAATCGA TCCGAACAAA ATATTGCCGT GTACCCCAAT CCAACCACCG GCATTTTGCA CATTGATTCG CAACAACCAG GTACGTTAAA CGTGCAGGTA ACAAATCTTC AGGGGCAGAC CGTAAAAAAA CAAACCTTGA CCGATGACAC GGCTGGCCTT GATATATCTG CCCTTCCGGA TGGGTTTTAT GTAGTAAAAA TTACAGGCGA TCAATCATCG GCTGTTGTGA AAGTATTGAA GCAGTAG
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Protein sequence | MKKILMLLTV IFMFTHAAFA QHWSTATLNE GKNNMSTGAI GPYLFFFSGD KWVGNTLYLV SQIEMIDTRT GAKLSTALPN DSMRSRVTSI SYGSKIYFAG GVGRLNGPSQ LNPSFYSKKV DIYDTLTGQW SAQYLSEARV DLGAGAANGK VVFGGGEKKT SSTAPSYIVD FYSTQTNTWT AGTFLPAQGI VQRTRLTGVS FQNKIYFAGG ETSSVPKDLI NVYDTELNTW RRDTLKEAKY NLKSFVYKDA IYFAGGQVSN LIPADTIEIY RPANDSWEYV KIPYFFKTVQ DGRERIYKEV VQAGCKAFFI PFPDRSGWIP NKPEFSSADS VAVYDLARKK WSYIDLPSKN IGVTAVATQN KVYFAGGADS ATAVFSNIID ILTLEPKLQL AVANTAVTAY DFGMVETGDL STVSVAVSNE GDYDLLFKDL TQRISISGDA ADFSIDHGML QLTDTLEPAE IIALPVSFHP TTTGTKQITL TINSNDPNTP AYTLTVTGTA TDIPTSILNR SEQNIAVYPN PTTGILHIDS QQPGTLNVQV TNLQGQTVKK QTLTDDTAGL DISALPDGFY VVKITGDQSS AVVKVLKQ
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