Gene CHU_3101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3101 
SymboldnaK 
ID4186551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3537971 
End bp3539869 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content41% 
IMG OID638073089 
Productmolecular chaperone DnaK 
Protein accessionYP_679683 
Protein GI110639474 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID[TIGR02350] chaperone protein DnaK 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAAA TTATCGGTAT CGACTTAGGA ACAACAAACT CATGCGTTGC AGTAATGGAA 
GGCAGTGAGG CAGTTGTAAT TCCAAACAGC GAAGGTAAAA GAACAACACC TTCAATAGTG
GCGTTTCTTG AAAATGGCGA ACGTAAAGTA GGTGATCCTG CTAAACGCCA GGCTATTACC
AACCCTACAA ACACGATCAG TTCGATTAAG CGTTTCATGG GTAAAAAATT CAGCGAATCA
AAAAGTGAAG CTGACCGTGC AACATACAAA TTAGAAGCTG GCAGTAACGA TACACCAAGA
GTCCGTATCG CAGACAGACA ATATACACCT CAGGAGCTTT CTGCAATGAT TCTTCAGAAA
ATGAAGACTA CAGCAGAAGA ATACTTAGGT CATGAAGTAA AAGAAGCAGT TATTACAGTA
CCTGCTTATT TCAATGATGC AGAACGTCAG GCAACTAAAG AAGCAGGTCA GATTGCTGGT
TTAGAAGTTA AACGTATCAT CAATGAGCCT ACTGCTGCTG CGCTTGCGTA CGGTATGGAT
AAAAAAGGCA AAGACATGAC TGTTGCAGTA TTCGATTTAG GTGGCGGTAC GTTTGATGTA
TCTGTACTTG AATTGGGCGA CGGTGTATTT GAAGTAAAAT CTACCAATGG TGATGTACAC
TTAGGTGGTG ACAACTTTGA TGAAGTGATC ATTGACTGGT TGGCTGGCGA ATTTAAATCT
GAAGAAGGCC TGGATCTCCG TCAGGACCCG ATGGCGTTAC AACGTTTGAA AGAAGCTGCT
GAAAAAGCTA AAATTGAATT ATCAAGTTCC GCTTCTACAG AAATCAACCT GCCATACATC
ATGCCGGTTA ATGGTATGCC AAAGCACTTA GTTAAAACAT TAACAAGAGC AAAATTCGAA
CAACTTGCAG ATAGCTTAAT TAAACGTACG TTAGATCCTT GTAAGCAGGC ATTGAAAGAT
GCAGGTTTAT CAATCGGTCA GATTGACGAA GTAATCCTGG TAGGTGGTTC TACACGTATT
CCAAGAATTC AGGAAGAAGT TGAAAAATTC TTCGGTAAAA AACCTTCTAA AGGTGTTAAC
CCGGATGAAG TAGTTGCATT AGGTGCTGCG ATTCAAGGTG GTGTATTAAC AGGTGAAGTA
ACCGATGTCT TATTGTTAGA CGTTATTCCA TTGTCTCTTG GTATCGAAAC AATGGGTGGT
GTGTTCACTA AATTGATCGA AGCAAACACA ACAATTCCTT CTAAAAAATC TGAGGTATTC
TCTACGGCAT CTGATAATCA GCCTTCGGTT GAAATTCACG TATTGCAGGG TGAGCGTGCA
TTTGCAAAGG ATAACAGATC TATCGGACGT TTCCACTTAG GCGATATTCC TCCTGCTCCG
CGTAACGTTC CTCAGATTGA AGTTACGTTT GATATCGATG CAAACGGTAT CTTAAACGTA
TCTGCTAAAG ATAAAGGAAC TGGCAAAGAG CAGAAAATCC GTATCGAAGC ATCTTCAGGT
TTATCTGCGG ATGAAATCGA ACGTATGAGA AACGAAGCGA AAGCAAACGA AGGTAAAGAC
AGAGAAGAAA AAGAGAAGAT TGAAAAAATC AATCAGGCTG ATTCAATGAT CTTCCAGACA
GAAAAACAAT TGAAAGAGTT TGGTGACAAA CTTTCTGCCG GAAACAAATC TGCGATCGAA
GCTTCGTTAG AAGATTTGAA AAAAGCGTTT GAAGCAAAAG ACATCTCTGC AATTGATACA
GCAATGGCTG CGATCAACAC GGCATGGCAG GCAGCTTCTC AGGAAATGTA CAGCGCTGAA
CAAGGTGCTG GTCAGCCAGG AGCGGATGCA GGTCAGTCTG GCCCTTCAGA CAGCGTTACT
GACGTTGAAT TTGAAGAAGT AGACGGAGAC AAGAAGTAA
 
Protein sequence
MGKIIGIDLG TTNSCVAVME GSEAVVIPNS EGKRTTPSIV AFLENGERKV GDPAKRQAIT 
NPTNTISSIK RFMGKKFSES KSEADRATYK LEAGSNDTPR VRIADRQYTP QELSAMILQK
MKTTAEEYLG HEVKEAVITV PAYFNDAERQ ATKEAGQIAG LEVKRIINEP TAAALAYGMD
KKGKDMTVAV FDLGGGTFDV SVLELGDGVF EVKSTNGDVH LGGDNFDEVI IDWLAGEFKS
EEGLDLRQDP MALQRLKEAA EKAKIELSSS ASTEINLPYI MPVNGMPKHL VKTLTRAKFE
QLADSLIKRT LDPCKQALKD AGLSIGQIDE VILVGGSTRI PRIQEEVEKF FGKKPSKGVN
PDEVVALGAA IQGGVLTGEV TDVLLLDVIP LSLGIETMGG VFTKLIEANT TIPSKKSEVF
STASDNQPSV EIHVLQGERA FAKDNRSIGR FHLGDIPPAP RNVPQIEVTF DIDANGILNV
SAKDKGTGKE QKIRIEASSG LSADEIERMR NEAKANEGKD REEKEKIEKI NQADSMIFQT
EKQLKEFGDK LSAGNKSAIE ASLEDLKKAF EAKDISAIDT AMAAINTAWQ AASQEMYSAE
QGAGQPGADA GQSGPSDSVT DVEFEEVDGD KK