Gene CHU_3089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3089 
SymbolevgS 
ID4183957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3528324 
End bp3530894 
Gene Length2571 bp 
Protein Length856 aa 
Translation table11 
GC content37% 
IMG OID638073077 
Productsensor histidine kinase/response regulator fusion protein 
Protein accessionYP_679671 
Protein GI110639462 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTTT CCATTCGTAC ACTCAATATT ATTTTTTCTA TTTCGCTATT GTTGCTGGCT 
TCAGCTTTCA TATACTCCTA TCTGAATATT CAAGGTTTAA GATCCGCCAA CCATTGGGTA
AATCATACCA ATAAGGTTAT TATAAGTTTA GAAAGTATCT ATTCAGATAT TAAAAATGCA
GAGTCCGGCG TAAGAGGATA TGCACTGACA AAAGACGCTT CGTATCTTGA ACAACAGGAT
CAATCACGTA CAAATATTAA AAATCAACTT ATTCTTCTTG ATTCACTTCT TGCAGATAAT
CCGGAGCAGC ACATTTACAT AGATACGTTA CAGAAAACTG TAAATGATCG CTTTTTTCTT
TTCAATGGCT TAATTAATCT TACAAATAAT AATGCAGACC AGGCGGAAGT GCTGCCGCTG
ATGCAAAAAG GAAAAGCATC TACGGAGCAT ATCTATAATC TGGTAAAAAA GATGAAAAAT
AATGAAGGAA TTTTATTGCT GCAGCGGAAT GAAAAAGCAG AAGCGCTTGA TAAAACAACA
CCCATTACCA TTGTATTCTC CGGCATATTT GGCTTCATGG TTTTAGTAAT TTCGTATTAT
TTCATTTTAG CAGACCTGAA ACAGCGCCGG AAGATCGCCA ATGAAGTAAA GATTAAAAAT
ACATTACTGG AATATGCGCA GCAGATTACT CAAATGGGGA CGTTTGAATA TAACGTTTTC
ACAAATACAT TATTCTGGTC AAATGAAATG TACAATATTT TTGAATTAGA CAGAAGCGTA
ATCCCTGAAA TAAATTTTAT AGATTCTCTT ATTAAAGAAG AATCAGAGAT TACACATAAC
AGAAGAAAGA AAAATTTTCA GCCTGGAGCA AGCTACTCAG ATGAATTAAA AATACGTACG
GTCAATGGCA ATGAAAAAGT TCTTATATCG AATGGATATG TAGTGAATGA AGAAAATGGG
CTGGTTGTGC ATGGTGCCAT TATTGACATT ACACCATTGA AAAAAGCAGA ACTAACAGCA
CGCGAACAAC AGGAACTCAT GCGGGTTGCC AAAGAAAAAG CAGAAAGTGC CAGTCAGTTC
AAAACACGTT TTTTATCAAA CATGAGCCAC GAGATCCGCA CGCCAATCAA TGCGATCCTT
GGCTTTACTG CTATTTTAAG TAAGCAGGAA CTTACCGAAC AACAAAAAAA ATTACTGAAA
AATATTTCTA TTTCAGGTGA ACTCTTATTA AAACTGATCG GCAATATTTT AGATATCAGT
AAAATTGAAG AAGGTAAAGT AATTATTGAA AGTAAATCGT TTCACCTCAA AGAATCGATC
CGTTCCGTGT TGAGTCCGTT TCAACATTCG GCTTCTGAAA AGGGATTACA GTTTCATTTA
ATTATTGACA AGTCTATTCC GGATTATTTG CTGGGCGATT TTCCGCGGAT CTCTCAAGTG
TTGGTGAATC TGATCGGCAA TGCATTGAAA TTTACCAGCC ATGGAAATAT TACTGTTTCT
GTTCTTCTTA CTAAAAAACA GGATGGACTT TCGTTTGTTG AGTTTGTTAT AAATGATACA
GGTATCGGAA TTCAAGCTAA TAAACAAGAC GAAATATTTG AAAGCTTCAC ACAGGCTAAT
GAATCTATTT CGGTAAAATA TGGCGGTTCA GGGCTTGGTT TATCAATCGT ACAGGAGGTT
GTACATTTAA TGGGCGGTAA CATACAGGTT CAAAGTCCTG CACATTATAA CGAACGCGGC
AAAGGCTACG GAAGTAAATT TTTCTTTACG CTTCCGTTTA AATTAGGCGA AAAGGGCGCT
GATCCGCAGG CAAAGAAAAC AGCTGTTCAG CCATTTCCAC GCGTATTACA TATTCTGGTG
GCAGACGACA ATGAAATGAA CCGTACCCTT GCAACCTATA CATTGCAGTC GTTAGGCTGT
ACGTTTGAGA TCGTAGAAAA CGGTTTGCAG GCAATACAAA AAGCGGCTGC CAATACCTAT
GATATCATAT TAATGGATAT GCAGATGCCT GTTTGCGATG GCTTACAGGC AACACGTCAG
ATCAGGCTGA ATAAAAATAC TACTCCTATC GTTGGCTTAA CGGCAAACGT TTTCCAGGAA
GACATTAACC GCTGCCTGGA TGCAGGTATG GACGGGCATT TAGGAAAACC TTATACAGAA
GAAGATTTGT ACCACATTAT TGACAAATGG GTTTTCAAAA ATGAAAAAAA TATCGCAGCC
TCAGTACCTT CATTTTCAAA TTATGAATTT ATCGAAAAGC TTTCCAAAAA TGATCCGGTG
ATTTTCCGTG AAATGCTGGA AATGTTTTTG AATCAGAATG CACAATTATT AAAAATAATA
CATACTGCAA TCAATGCCGA AGATCTGGAG ACACTTTCCT TTAACGTACA TCAATACAAA
TCATGTGCGC GCATGTTAAA CATTGAAAAA CAGATTTCGC TGATTAAGCA GATTGAAGAA
AAAATTGAAG CGCGTGTTTC TCTTGAAACA ATACGTACAG ATATTATGCA GCTTATTGAA
ACCGGAGCAT TAGTATCAAA AGAAATTGAG CAGAAATTAT TAATCGTTTA A
 
Protein sequence
MNLSIRTLNI IFSISLLLLA SAFIYSYLNI QGLRSANHWV NHTNKVIISL ESIYSDIKNA 
ESGVRGYALT KDASYLEQQD QSRTNIKNQL ILLDSLLADN PEQHIYIDTL QKTVNDRFFL
FNGLINLTNN NADQAEVLPL MQKGKASTEH IYNLVKKMKN NEGILLLQRN EKAEALDKTT
PITIVFSGIF GFMVLVISYY FILADLKQRR KIANEVKIKN TLLEYAQQIT QMGTFEYNVF
TNTLFWSNEM YNIFELDRSV IPEINFIDSL IKEESEITHN RRKKNFQPGA SYSDELKIRT
VNGNEKVLIS NGYVVNEENG LVVHGAIIDI TPLKKAELTA REQQELMRVA KEKAESASQF
KTRFLSNMSH EIRTPINAIL GFTAILSKQE LTEQQKKLLK NISISGELLL KLIGNILDIS
KIEEGKVIIE SKSFHLKESI RSVLSPFQHS ASEKGLQFHL IIDKSIPDYL LGDFPRISQV
LVNLIGNALK FTSHGNITVS VLLTKKQDGL SFVEFVINDT GIGIQANKQD EIFESFTQAN
ESISVKYGGS GLGLSIVQEV VHLMGGNIQV QSPAHYNERG KGYGSKFFFT LPFKLGEKGA
DPQAKKTAVQ PFPRVLHILV ADDNEMNRTL ATYTLQSLGC TFEIVENGLQ AIQKAAANTY
DIILMDMQMP VCDGLQATRQ IRLNKNTTPI VGLTANVFQE DINRCLDAGM DGHLGKPYTE
EDLYHIIDKW VFKNEKNIAA SVPSFSNYEF IEKLSKNDPV IFREMLEMFL NQNAQLLKII
HTAINAEDLE TLSFNVHQYK SCARMLNIEK QISLIKQIEE KIEARVSLET IRTDIMQLIE
TGALVSKEIE QKLLIV