Gene CHU_3079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3079 
Symbol 
ID4183947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3518266 
End bp3518949 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content43% 
IMG OID638073067 
Producthypothetical protein 
Protein accessionYP_679661 
Protein GI110639452 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones71 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA CAAGCGTATC TGATATTAAA GTAGTAGTAG CAGGACCAGA ACATAAACAT 
TTAGCTGAAG CCATCGTTGA TGAAATGGCT GAAAGTGCAA AAGCCCGCGG AACAGGTATT
GCCAAGCGTA GCCCCGACTA CATCCGTCAG AAAATGGATG AAGGCAAAGC TATTATTGCC
GTTACCAAAG CAGGCGAGTT TGCAGGTTTT TGTTATATTG AATCCTGGAG TCACGGTAAA
TACGTGGCTA ACTCCGGCTT GATTGTAGCT CCTGACTTCC GTCAGTATGG CTTGGCGACC
AAAATCAAAG AAAAGGCGTT TGAATTATCG CGTAAAAAAT TCCCTGATGC TAAGTTATTC
GGATTAACAA CCTCTGCGGC TGTTATGAAG ATCAACTCAG AACTGGGCTA CAGACCTGCG
CATTATACCG AGCTTACCAA CGATGAAACC TTCTGGAAAG GGTGTTCCAG CTGCATCAAT
TATGAGATCC TGAAAAGCAA GGACCGTAAG ATGTGCATGT GTACGGCCAT GGTGTACGAT
CCGGAAGAAA AGAAAAAGAA AAAATGGGAT TTCATTACGG AATCAAAACT TTGGGAAAGA
TGGCAACGCT TAAAAAATCA CAAGCTGCTG AAGTCTTTTG GCAAGGGTAG TGATAAGATA
TTGTCGTTTC TTGGATTGGC GTAA
 
Protein sequence
MKKTSVSDIK VVVAGPEHKH LAEAIVDEMA ESAKARGTGI AKRSPDYIRQ KMDEGKAIIA 
VTKAGEFAGF CYIESWSHGK YVANSGLIVA PDFRQYGLAT KIKEKAFELS RKKFPDAKLF
GLTTSAAVMK INSELGYRPA HYTELTNDET FWKGCSSCIN YEILKSKDRK MCMCTAMVYD
PEEKKKKKWD FITESKLWER WQRLKNHKLL KSFGKGSDKI LSFLGLA