Gene CHU_3078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3078 
SymbolpurU 
ID4183946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3516823 
End bp3517647 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content44% 
IMG OID638073066 
Productformyltetrahydrofolate deformylase 
Protein accessionYP_679660 
Protein GI110639451 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0788] Formyltetrahydrofolate hydrolase 
TIGRFAM ID[TIGR00655] formyltetrahydrofolate deformylase 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATTA TTATCGATTG CGAGGACCAG AAAGGGTTAA TTCATAAAAT TACAGGCGTA 
TTGGCAGGGT TGAACCTTAA TATTACCGAG AACAGGGAAT TTGTTGAAAA ACAGCGCAAT
CGGTTTTTAA TGCGTACAGT TGTAGAAGGA GATATCGATG CGGCGGTTTT ACGTGCGGCG
CTGGAAGCCG TTTTACCGGC TGATCACAGC TTGCTGGTAA GCAACGGAGA ATTGAAAAAA
ATGGTTATTA TGGTAACCAA AGAAGAGCAT TGCTTAACCG AGCTGATCAG TAAATATTAC
TTCGGCAACC TGAAGGTAAA TCTGGTAGCG GTTATCGGAA ACCACCAGCA TTTAAAGGCC
TATACGGAGA AGTTTAACAT TCCGTACCAC TTCATTTCAC ATGAAGATAA AAGCCGCGAA
ACACACGAAG CAGAATTGCT GGACTGCCTG AAACAATACA ATCCGGATTA CATTGTGCTG
GCAAAGTTTA TGCGTATTCT GAGTGAAGAA TTTACATCGC AGTATCCGTC CCGCATGATC
AATATTCACC ATAGTTTCTT GCCGGCATTT AAAGGCGCAA ACCCATACAG ACAGGCATAT
GAGCGTGGTG TAAAAATTAT CGGAGCCACG GCGCATTTTG TAAACCAGGA CCTGGATGAA
GGACCGATCA TTCACCAGGA AGTGATTCCG GTAGATCATT CCCTGAGCCC CATGGAAATG
GCTGCTGCAG GTAAAGACGT GGAAAAACTC GTGCTGGCGA AAGCGCTGCA GCTCGTACTG
GAACAGAAGG TATATGTAAG CGCCAATAAG ACGGTCATAT TTTAA
 
Protein sequence
MIIIIDCEDQ KGLIHKITGV LAGLNLNITE NREFVEKQRN RFLMRTVVEG DIDAAVLRAA 
LEAVLPADHS LLVSNGELKK MVIMVTKEEH CLTELISKYY FGNLKVNLVA VIGNHQHLKA
YTEKFNIPYH FISHEDKSRE THEAELLDCL KQYNPDYIVL AKFMRILSEE FTSQYPSRMI
NIHHSFLPAF KGANPYRQAY ERGVKIIGAT AHFVNQDLDE GPIIHQEVIP VDHSLSPMEM
AAAGKDVEKL VLAKALQLVL EQKVYVSANK TVIF