Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3068 |
Symbol | kefB |
ID | 4185866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3506426 |
End bp | 3508321 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638073057 |
Product | potassium efflux system protein |
Protein accession | YP_679651 |
Protein GI | 110639442 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAACA ACTTTTTATT TCAAACCGTT ATTTATTTAA GTGCAGCAGT TGTCTGCGTG CCCATTGCAA AGCGTTTTGC GATGGGTTCT GTATTGGGTT ACCTGCTGGC AGGTATGTTG ATTGGTCCCT TCGTATTAGG TTTCATCGGG CAGGAAGGGA AAGATATCAT GCACTTTGCT GAATTCGGCG TAGTGATGAT GCTCTTCTTA ATAGGCCTGG AGCTGGAACC GGCTCACCTC TGGAAAATAC GCAAACAGAT TTTGGGTGTT GGGCTTTCGC AGGTATTGAT TACAACTGCT GTTGTAATGA TCATCGCTAT TGCTGCCAGT CTCGCCTGGC AGAGTGCGCT CGCGATCGGG TTTGCATTTG CCATGTCGTC AACCGCAATC GTATTGCAAT CGTTAAAAGA AAAAGGATTA ATGAAAGCAC CATCAGGTCA GTTTTCATTT GCTGTTTTAC TATTTCAGGA TATTGCTGTA ATTCCGATTC TCGCAATTTT ACCCTTATTG GTTTTCCTGC CTGTAAGCAT ACCACAGGAT GCACATAGTG GTGGTATTAA TGATTTGCCG CGCTGGTTAC AAACAGCTTC TGTACTTGGT GCAGTGGGAG GGATTGTATT GATCGGAAAA TATGCAATTG TTCCTTTGCT GCGCGTGATT GCGAAAACAC ACATGCGTGA ATTGTTTACC GCAAGTGCTT TATTGATCGT TGTTGCTATT GCCTTGCTGA TGCAGCAGGT AGGGCTAAGC CCCGCATTAG GCACATTTCT GGCAGGTGTT ATTTTAGCAA ACAGCGAATT CAAACATGAA CTGGAATCGG ATCTGGAACC ATTCAAAGGA TTGCTGCTGG GCTTGTTCTT TATTGCTGTT GGCGCATCAA TCGATTTCAG TCTGGTGTAT GAAGAATTAT TGACCATTGC AATACTTACC TTCAGTATTA TTATAGTTAA AGCATCTATA TTATTTGCGA TCGGTAAGAA AGCAAAACTT TCGCTGGATC AGAATCTGAT CTTTGCTATA GGTTTATCGC AGGTGGGAGA ATTTGCGTTT GTCTTGTTTT CATTCATTGG TACACACAAC ATATTATCGA AAGCGCAGAC AGATATGATG ATGGCGGTTA CAGCACTGAG TATGACCATA AGTCCCTTGC TATTGATTGT GCTGGATAAA TGGATCCTGC CAAAGCTGCA TGCTGCAGAC AAAGAACAGA CAACAAAAAG AGCAGATCAT ATCGAAGAGC GGAATAATGT GCTCCTGGTA GGTTTTGGGC ATTTCGGAAC AACGCTTGCA CGCTTTCTCA GGGCAAATGG TGTTGCTGCA ACTGTGCTCG ACAATAATTC AGACCAGGTA GATTTGTTAA GAAAAATGGG CTTTAATGTT TTTTATGGAG ATGCAACACG TATTGATATC CTGGAAGCAG CCGGAGCTGC GGAAGCTAGT ATTCTCATTA TTGCAATTGA CTCTCCTGAA ACCAATTTAG AGATTGTTAA AATTGTGAAA CAACATTTTC CCAATCTGGA AATTATGGTG CGTTCTAAAA ATAGAATGGA TGCGTATGAA CTATTGGATG AAGGTGTCAG CAATATTTAC CGGGAACATT TGGATACATC TATTCGCTTG GGTGTTGATG TTATGAAGAA GTTAGGATAC CGCACCTATT CTGCTTTTCG TGCCGGACAG AATTTTATTA AATATGATGA AGCGGCATTA AGGACATTAT CGCAAAACAG AAAAAATATG AAAGTGTATA TTTCGGATGT GCGGGAACAG ATTGCATTAC AGGAAGAATT ATTGCAGATC GATCGGCAAG TAGTACCATC TGCAAATGAT CATGCCTGGG ATAGCAGAGA AATGCGTGAA AAAATCAGGG AAATGGACAA TCAGAAATCA GTATAA
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Protein sequence | MENNFLFQTV IYLSAAVVCV PIAKRFAMGS VLGYLLAGML IGPFVLGFIG QEGKDIMHFA EFGVVMMLFL IGLELEPAHL WKIRKQILGV GLSQVLITTA VVMIIAIAAS LAWQSALAIG FAFAMSSTAI VLQSLKEKGL MKAPSGQFSF AVLLFQDIAV IPILAILPLL VFLPVSIPQD AHSGGINDLP RWLQTASVLG AVGGIVLIGK YAIVPLLRVI AKTHMRELFT ASALLIVVAI ALLMQQVGLS PALGTFLAGV ILANSEFKHE LESDLEPFKG LLLGLFFIAV GASIDFSLVY EELLTIAILT FSIIIVKASI LFAIGKKAKL SLDQNLIFAI GLSQVGEFAF VLFSFIGTHN ILSKAQTDMM MAVTALSMTI SPLLLIVLDK WILPKLHAAD KEQTTKRADH IEERNNVLLV GFGHFGTTLA RFLRANGVAA TVLDNNSDQV DLLRKMGFNV FYGDATRIDI LEAAGAAEAS ILIIAIDSPE TNLEIVKIVK QHFPNLEIMV RSKNRMDAYE LLDEGVSNIY REHLDTSIRL GVDVMKKLGY RTYSAFRAGQ NFIKYDEAAL RTLSQNRKNM KVYISDVREQ IALQEELLQI DRQVVPSAND HAWDSREMRE KIREMDNQKS V
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