Gene CHU_3055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3055 
SymbolqueA 
ID4185853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3496418 
End bp3497464 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content40% 
IMG OID638073044 
ProductS-adenosylmethionine:tRNA ribosyltransferase-isomerase 
Protein accessionYP_679638 
Protein GI110639429 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 
TIGRFAM ID[TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.506985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAT CTGAATTTAA ATTTGCCCTT CCGGCAGAAC TCGTTGCACA ACACCCCGCT 
GCAAACAGAG ACGAAGCAAA AATGATGGTT ATTAATCGCG CTACAGGCAC CATCGAACAC
AAAATTTTCA AAGACATTAT CAATTATTTC GACGAAGGTG ATATCATGGT TATGAACAAT
ACCAAGGTAT TTCCAGCGCG TTTATATGGT AACAAAGAAA AAACAGGCGC TAAGATTGAA
GTATTTCTTT TACGCGAACT GAATGCTGAA CTACATCTTT GGGATGTATT GGTTGATCCG
GCGCGTAAGA TACGTGTAGG AAATAAATTA TACTTTGGCG AAAGCGACCT GGTGGCTGAG
GTTGTAGATA ACACAACTTC CAGAGGCCGT ACGATCCGTT TCTTATTTGA CGGTAATTCG
GAAGACTTTT CAAAAATCAT TGAAACGATT GGCGAAACGC CTCTTCCGCG TTATATCAAA
CGTCCGATTG AAGAAGCAGA TAAAGACCGT TACCAGACAA TCTTTGCTGA GAACAAAGGT
GCGGTAGCTG CTCCAACAGC CGGCTTGCAC TTTACAAAGC AGGTAATGAA GCGTATGGAA
ATCAAAGGTG TAAACTTTGC TCCATTAACA TTACATGTGG GCTTAGGTTC TTTTAGAACG
GTAGACGTTG AAGATCTTAC GAAACATAAA ATGGATTCGG AAAACTTTAT CATTGAAAGC
ACAACAGCCG ACGTGGTAAA TAAAGCACTG GATAATAAAA AACGCGTATG TGCCATTGGT
ACAACAAGTA TGCGTGCGTT AGAATCTTCT GTTTCAGCAA ACAACCGTTT GAAACAAAAT
GCAGGATGGA CAGATCGTTT TATCTTCCCG CCATATGATT TTAAAATCGC AAACTGTATG
CTTACAAATT TCCATATGCC GGAATCTACG CTATATATGA TGGCATGTGC ATTTGGCGGA
TATGAGTTAA TGACAAAAGC ATATAAAACC GCTATAAAAG AGAAATATAA TTTCTTAAGT
TACGGAGACG TAATGCTCAT CATCTGA
 
Protein sequence
MKLSEFKFAL PAELVAQHPA ANRDEAKMMV INRATGTIEH KIFKDIINYF DEGDIMVMNN 
TKVFPARLYG NKEKTGAKIE VFLLRELNAE LHLWDVLVDP ARKIRVGNKL YFGESDLVAE
VVDNTTSRGR TIRFLFDGNS EDFSKIIETI GETPLPRYIK RPIEEADKDR YQTIFAENKG
AVAAPTAGLH FTKQVMKRME IKGVNFAPLT LHVGLGSFRT VDVEDLTKHK MDSENFIIES
TTADVVNKAL DNKKRVCAIG TTSMRALESS VSANNRLKQN AGWTDRFIFP PYDFKIANCM
LTNFHMPEST LYMMACAFGG YELMTKAYKT AIKEKYNFLS YGDVMLII