Gene CHU_3053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3053 
SymboleutB 
ID4183436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3493976 
End bp3495331 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content43% 
IMG OID638073042 
Productethanolamine ammonia-lyase heavy chain 
Protein accessionYP_679636 
Protein GI110639427 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4303] Ethanolamine ammonia-lyase, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.900689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.183286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAGC ATACCGTATC ACAACATGTT TTTACGTTTG ACAGCTTAAC CGAATTGATG 
GCAAAGGCAA GTCCGCTGCG ATCAGGTGAT CAACTGGCAG GTATTGCAGC GGGTTCTTAT
CAGGAACGGA TCGCGGCACA AATGGCGTTG GCAGATCTTC CACTCACTAC TTTTTTACAA
GAACCATTAA TTCCTTACGA AAGTGATGAA GTAACACGAT TGATCTTTGA TACGCATGAA
CACACCGCAT TTACAGCTAT TGCACATCTT ACCGTAGGTG ATTTTAGAAA TTTTTTGTTG
AGCAACAATA CACACACGTC TCAGTTAACA GCATTGCAAA AAGCAATTAC GCCGGAAATG
GCAGCAGCTG TTTCCAAAAT AATGAATGTA CAGGACCTGA TTCTGGTCAG CTCGAAATGT
GAGATCATTA CACGCTTTAG AAATACGATT GGTGTTAAAG GTTGTATGTC TACAAGGCTG
CAGCCCAATC ATCCAACAGA CGATTTAAAA GCGATCATGG CTTCTGTCCT GGATGGATTA
TTTTATGGGA GCGGAGACGC GGTTATTGGC ATCAATCCGG CAACAGATCA TATATCCACT
CAGGTTCAAT TGCTGAAACT GATCGATGCT GTACGAGAGC AATATGCTAT TCCTACACAA
TCGTGTATCC TCAGTCACAT TACAAATACC ATTCTTGCTA TTGAACAGGG TGCGCCCGTT
GACCTGGTTT TTCAATCTAT CGGAGGAACA GAAAAAACAA ACAGCAGTTT TGGTATAAAT
CTTTCGCTGC TGCAGGAAGG TTACGAAGCG GCGTTATCGC TGGGGAGAGG AACGATAGGT
AATAACGTTA TGTATTTTGA AACGGGGCAG GGCAGTTCAC TTTCTGCGAA TGCGCATTAC
GGCATTGATC AGCAAACGCT GGAAGCACGT GCATATGCAG TTGCCCGTGC GTTCAATCCG
CTTCTGGTGA ATACAGTGGT GGGTTTTATT GGCCCTGAAT ATTTGTTTGA TGGAAAACAA
ATTATACGCG CAGGACTCGA AGATCATTTT TGCGGCAAAC TGATGGGGCT TCCTATGGGC
TGCGATATCT GTTATACCAA TCATGCAGAT GCGGATCAGG ATGATATGGA TGCATTATTA
ACGTTGTTAG GTGTAGCAGG CTGTAATTTT ATTATGGGAG TACCCGGCTC AGATGATATT
ATGCTGAACT ATCAAAGCAC TTCTTTTCAC GATGCATTGT ATATCCGAAA ACTACTGAAC
GTAAAACCTG CACCCGAGTT TGAAGAATGG TTATTGAAAA TGGGCATCAT GAATACGCAA
CATGAAATTA CGGTTCACAG AATATACTGC GGTTAG
 
Protein sequence
MYKHTVSQHV FTFDSLTELM AKASPLRSGD QLAGIAAGSY QERIAAQMAL ADLPLTTFLQ 
EPLIPYESDE VTRLIFDTHE HTAFTAIAHL TVGDFRNFLL SNNTHTSQLT ALQKAITPEM
AAAVSKIMNV QDLILVSSKC EIITRFRNTI GVKGCMSTRL QPNHPTDDLK AIMASVLDGL
FYGSGDAVIG INPATDHIST QVQLLKLIDA VREQYAIPTQ SCILSHITNT ILAIEQGAPV
DLVFQSIGGT EKTNSSFGIN LSLLQEGYEA ALSLGRGTIG NNVMYFETGQ GSSLSANAHY
GIDQQTLEAR AYAVARAFNP LLVNTVVGFI GPEYLFDGKQ IIRAGLEDHF CGKLMGLPMG
CDICYTNHAD ADQDDMDALL TLLGVAGCNF IMGVPGSDDI MLNYQSTSFH DALYIRKLLN
VKPAPEFEEW LLKMGIMNTQ HEITVHRIYC G