Gene CHU_3052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3052 
SymboleutC 
ID4183435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3493208 
End bp3493945 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content42% 
IMG OID638073041 
Productethanolamine ammonia-lyase small subunit 
Protein accessionYP_679635 
Protein GI110639426 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4302] Ethanolamine ammonia-lyase, small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.286681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAG ATTACTGGAA GGAATTACGG AAGTTTACAC ATGCACGTAT AGCTATAGGC 
CGTGCAGGGA ATGCGTTGCC TACTTCTGAA GTATTGAAGT TCCGGATGGC ACATGCCATA
GCACGGGATG CCGTTCAGTC TGAAGTAAAC ATGGAGTTGT TACAGGAAAA ACTTTTTGAT
CTGGGACTGA ACGTGCAACA GGTGAAAAGC CACGCCGCAG ATCGGTTGGA TTATATAAGA
CATCCGCACA AGGGTAGATT GCTGCATGAG CAAAGCAGAC AGCAATTAGA AGCATTGCAT
ATTGAGAAAA CAGATTTGTG TATCATCTTT GCCGACGGTT TATCCGCAGA TGCTGTGAAT
CTGCATGCCA TTCCTTTTCT AACAATCTTA TTGAAAAATT TATCGTTCTG GAACATTGCT
CCGGTAGTGC TTGCAGAACA AGGTAGGGTT GGATTATCTG ATCCCGTTGG TGAAGCACTG
AACGCACGAA TATCATTGAT TTTATTAGGA GAACGTCCGG GTTTAAGCGC ACCAACAAGC
TTGGGTGCAT ATATCACCTA TATGCCGCAA AGCGGCAATA CGGATGAAAA AAGAAATTGT
GTTTCTAATA TTCAGCCTGC AGGATTGAGC TATGAACAAG CCGTGGAAAA AATTTCATAT
CTCTTACATG AAATGCGCAG GCAGCAAGTA TCTGGTATTA TGCTTAAAGA TAATCAGCAA
AATAATTTCT TATATTGA
 
Protein sequence
MEEDYWKELR KFTHARIAIG RAGNALPTSE VLKFRMAHAI ARDAVQSEVN MELLQEKLFD 
LGLNVQQVKS HAADRLDYIR HPHKGRLLHE QSRQQLEALH IEKTDLCIIF ADGLSADAVN
LHAIPFLTIL LKNLSFWNIA PVVLAEQGRV GLSDPVGEAL NARISLILLG ERPGLSAPTS
LGAYITYMPQ SGNTDEKRNC VSNIQPAGLS YEQAVEKISY LLHEMRRQQV SGIMLKDNQQ
NNFLY