Gene CHU_3048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3048 
Symbol 
ID4183431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3490830 
End bp3491414 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content37% 
IMG OID638073037 
Producthypothetical protein 
Protein accessionYP_679631 
Protein GI110639422 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID[TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.314346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.708651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA AAATTTGGAT TTCGGTAGTT GTTTTATTTA TTCTTGCGCT TATAATCAAA 
CCGGTAATGA CCGCAGCACA GCAAAAGAAA GAGTTTAAGT ATCACAACAA TCTTTTAAAA
ACAATTACAC TTACTTCAAC GGATTTTATT GCAGACGGAA AAATCCCTGT TGAATGTACA
GGAGATGGAG AAGAGCTTTC TCCTGCATTA CAATGGACTA ATATACCGAA AGGAACAAAA
TCATTTGTGT TGCTGATGAC AGATTATGAT GCTCCTGCAC CGTTTTTTAA AATAAGCACC
GTAGATCATT GGGTTATATA TAATATTCCT GCTGAACATA CTGCATTAAG CAAAGGCCTG
ACAAGCGGGC AACTGCAGGA GAGTAATATA AGTTCAGGAC AGAATTTTAA GAAGGGAATA
GAATACAAAG GCCCAAAGCC GCCGCTTGGT GTGCACAACT ATTATTTCCG TGTATATGCG
TTATCTGTCT CTGCACTTAA TCTGAAAAAT CCAACAAAAC AAGAGGTCAT GAACGCAATG
AAAGGGAAGG TCCTTGCATA TGGAGAATTG ATAGGGAAAT ATTAA
 
Protein sequence
MKKKIWISVV VLFILALIIK PVMTAAQQKK EFKYHNNLLK TITLTSTDFI ADGKIPVECT 
GDGEELSPAL QWTNIPKGTK SFVLLMTDYD APAPFFKIST VDHWVIYNIP AEHTALSKGL
TSGQLQESNI SSGQNFKKGI EYKGPKPPLG VHNYYFRVYA LSVSALNLKN PTKQEVMNAM
KGKVLAYGEL IGKY