Gene CHU_3044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3044 
Symbol 
ID4183427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3486509 
End bp3487330 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content37% 
IMG OID638073033 
Producthypothetical protein 
Protein accessionYP_679627 
Protein GI110639418 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.461532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAA CTATGAAACG CTTGCTGACA TGTTTATTCG TATTGGTTTT GGCAACTTCG 
TTTACATTAC AAACACAGGC GCCTCAATCT CCATTTGCTG CTTATGGTCC TAAAGAATCG
TTAGTGTATC GCTTACATTA CGGATTCGTT ACGGCTGGGG AAGCACGTAT AGAAGTAGAT
CCAACCTTGT ATATGATCAA TAATAAAGTT TGCTACAAAA CATCCGTTAT TGGTGCTACT
TCAGGGTCTG TTGATATTGC CATGCGCGTG CGTGACCAGT GGACCAGCTA CATAGATACT
GCAACTAAAA TCCCGCAGCG GAGCATGCGT AATATTGCAG AGAATAACTA TCGTTTGAAA
GAAATGGTGA TGTATGATTA TGCAAACAAA AAGGCTAATG TAATTACAGA AAGTGGTAAG
GAACTTGAAA AATCTACTGC GGAATATGCA ATTACAAATA ACCTGCAGGA CATTGTAAGT
GGTGCATATT ACCTGAGAAC ACTGGATTAT TCTAAAATGG CTCCGGGAAC GCCAATCACT
ATGAAGGCTT TCTTTGAAGA CAAGTTATAT GATTTTACCC TGAAATATGT GGGTAAAGAA
AAATTACACA CAAAACACGG ATATATTAAT GTTATTAAAA TTCAGCCTGT AATGCCGGAT
AATGAATTGT TTGATGGCGG TAATTCAATC AGATTGTGGC TTTCAGATGA TGATAATAAA
ATACCTGTAA AGATTGAAGC GGATATGTTT GTAGGTAAAG TTGAAGTTGA ACTAAAAAGC
TTTGCAGGAT TGAAGCATCC GATCGTATTT ACTAAAAAAT AA
 
Protein sequence
MTKTMKRLLT CLFVLVLATS FTLQTQAPQS PFAAYGPKES LVYRLHYGFV TAGEARIEVD 
PTLYMINNKV CYKTSVIGAT SGSVDIAMRV RDQWTSYIDT ATKIPQRSMR NIAENNYRLK
EMVMYDYANK KANVITESGK ELEKSTAEYA ITNNLQDIVS GAYYLRTLDY SKMAPGTPIT
MKAFFEDKLY DFTLKYVGKE KLHTKHGYIN VIKIQPVMPD NELFDGGNSI RLWLSDDDNK
IPVKIEADMF VGKVEVELKS FAGLKHPIVF TKK