Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3032 |
Symbol | |
ID | 4184965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3474555 |
End bp | 3475793 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638073021 |
Product | zinc protease |
Protein accession | YP_679615 |
Protein GI | 110639406 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTAAAG AATTTAATGT TTATCAATAT CCCAACGGGA TAACGTTGCT GCATAAACAG GTTTTATCAA CCCGTATTGC TCATTGTGGT TATATTTTTG ATGTGGGCAG CCGGGATGAA GATTTGAAAA CGCAAGGGTT GGCACATTTT TGGGAGCATA TGGCTTTCAA AGGAACTGAC AAACGTAAAA CATTTCAGAT ACTAAGCAGC CTGGAGCAGG TGGGAGGCGA TTTAAATGCA TATACAACCA AAGAAAAAAT ATGGTTTCAT GCATCACTGC CTTTTACGTA TCTGGAGCGT GCAGCAGACG TGCTGACGGA TATTTCTTTC AATTCAATTT TTCCCGAAAA AGAAATTGAA AAAGAAAAAA AAGTTGTGCT TGAAGAAATG CATATGTATG CAGATAACCC GGAAGACGCT ATTCAGGATG AATTTGAAAC ATTAATATTT CCGGAACATT CATTAGGGTA TAATATTTTA GGTACCGAAA AGACACTGCA ATCATTCACG CAGCAGAATT TAAAATCATT TCTTAAAAAG AATATTGATA CAAGCAGAGT TGCATTTGTG GTGCTTTCGC CGCAATCTTT TACAGAGGTA AAATACATTA CAGATAAATA CATCCCTCAT GTGAAAGCGC AGCATTCAGC CAAGGTACGC GAAAAAAACA GAGGTTTTAA ACCAGCTACC CTCATCAAAA AGATTGATGC TTCTCAAACA CATTGTGTAA TCGGCAGTCT TGGGCTGAAT ATAAAAGAAG AGCGGAGATT GGGTTTGTTC TTATTGTCAA ACCTGCTGGC AGGCCCGGGT ATGACATCTA CGCTGAACAT GGCTATGCGA GAGAAGAAAG GCTATGTATA TACCATAGAA TCAAACTTTA CTTCTTATAT CGATACGGGT GTGTATAGTT TTTATTTTGC TACGGAATCA AAACAATTTG AAAAAGCACT GGATGTTTTT CATAAAGAAA TAGCAAAAGT AAGGGAAAAG AAATTAAGTA CAGTTCAGCT GCATCGCTTA AAAGAACAGA TTAAAGGCCA GTTGATAATG GCTGAAGAGA ATAACAGTAA CTTTATGCAA ATGATGGGCA AGAGCTATCT GGATTTTGGT AAGATAGATT CGTTTGATCA TATCATAAAA AAGATAGACG GCATATCGGC AGAAGTTATT AACGACTTGG CCAACCAGTT GATGAATCCT GCGCGCATGA GTAAGTTGAT TTATGAACCA GAAGCATAA
|
Protein sequence | MTKEFNVYQY PNGITLLHKQ VLSTRIAHCG YIFDVGSRDE DLKTQGLAHF WEHMAFKGTD KRKTFQILSS LEQVGGDLNA YTTKEKIWFH ASLPFTYLER AADVLTDISF NSIFPEKEIE KEKKVVLEEM HMYADNPEDA IQDEFETLIF PEHSLGYNIL GTEKTLQSFT QQNLKSFLKK NIDTSRVAFV VLSPQSFTEV KYITDKYIPH VKAQHSAKVR EKNRGFKPAT LIKKIDASQT HCVIGSLGLN IKEERRLGLF LLSNLLAGPG MTSTLNMAMR EKKGYVYTIE SNFTSYIDTG VYSFYFATES KQFEKALDVF HKEIAKVREK KLSTVQLHRL KEQIKGQLIM AEENNSNFMQ MMGKSYLDFG KIDSFDHIIK KIDGISAEVI NDLANQLMNP ARMSKLIYEP EA
|
| |