Gene CHU_3022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3022 
Symbol 
ID4184955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3465446 
End bp3466093 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content37% 
IMG OID638073011 
Producthypothetical protein 
Protein accessionYP_679605 
Protein GI110639396 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGA TAAACGAAAA GAATTTTAAT TTTTATAATC GGATTGGCCT GGATACTTTT 
CAGGCACTTG CGAAAGACGG AGGTTTCAGT ACGTTTGTTG ATTTGGAAAT TGCATATCGA
TATATACAGC CAACAGAAAA TATTGCAGAG ATAGGTGCTG GTTACGGCCG CTGCATTGAC
TTTTTATTAG CTAAAAAGCA TCAGGGTAAA ATAATTGCAG TAGAACAGAG TCCGAAGTTA
TGCGAACATC TGCGGGCCGT TTATTCATCT ACTATTAAAA TAGTTGAAGG CGATATTTAT
AAAGTGTCTT TTGATCATCA AATTGATGCT GCATTATGGA TGTGGTCCGG AATGATTGAT
TTTTCGGTAG AAGAACAAGC GGCAGTGATT AAACATATAC ATGAACTGCT AACCCAGAAG
GGTAAATTAT TTATTGATAT TCCACGTATA GGAATTAAAA CAATTGCAGA TCATATCGAT
CAGCAACGCA TTAAGTTAAC AACCGATTTT GGTGAGATTG AATGTTACAT TCCGCTCAGT
TCAGAGGTTA AAGAGTATGC AGATGCTGCC GGTTTTACGC GCGTGGATGA AATTAATTAT
GAGACTGCTA CAGATAAAAA GCGTACCATG TATATTCTGA TGAAATAA
 
Protein sequence
MEQINEKNFN FYNRIGLDTF QALAKDGGFS TFVDLEIAYR YIQPTENIAE IGAGYGRCID 
FLLAKKHQGK IIAVEQSPKL CEHLRAVYSS TIKIVEGDIY KVSFDHQIDA ALWMWSGMID
FSVEEQAAVI KHIHELLTQK GKLFIDIPRI GIKTIADHID QQRIKLTTDF GEIECYIPLS
SEVKEYADAA GFTRVDEINY ETATDKKRTM YILMK