Gene CHU_3019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3019 
Symbol 
ID4184952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3460629 
End bp3462206 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content37% 
IMG OID638073007 
Producthypothetical protein 
Protein accessionYP_679601 
Protein GI110639393 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1452] Organic solvent tolerance protein OstA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACATA GGTTAAATAT ACAATTTAAT TATTTTTGTA AAATGATTAC ATCCATGTTT 
CTACGAATAT CTTTAATTAT ACTACTGGTA ATGGGTTTTT TAAATGGAGG CGATTGTTTT
GCGCAGACAC CTTCAGAAAA AATCGAATTA ATACAAGCCG GCGCCTTAAT GGGCAGCGAA
GGTAAGGAAG CCTATGTAAA ACTAAAGGAT CATGTTATAT TCAAACAGGG AGAAATGTTT
TTGTATTGTG ACTCGGCGTT TCAGTATGCA AAGACAAACT ATGTGGAAGC GTTTGGTCAC
GTACGCCTGG TACAGGGCGA TACATTAACC ATGACCTGTA ATAAACTGGA ATATGATGGT
AACACGAAAA AAGCAAAAGC AATCGGTGAT GTTATATTGA TTGATAAACA AACGATCTTA
AAAACAACTG CGTTAAACTA CGATCGTGAA GGTAAAAATG TAAGTTATTT TTCCGGTGCC
AATATCAGTG ATAAAGGAAA TAACCTAACC AGTACTATTG GTGTATACAA TACAGGTACA
AAAATATTCA CGTTTAAAAA GAACGTACAC ATTACCAACC CCGGACAAGG TTTCCTGCTA
GATGCCGATA CGTTGCAATA TAATTCTCAA TCCCGCCTTG CCACGTTTAG GGGCGAAACC
AAGATCACCA CAAAAGATGG TGTGATTAAA TCAAAAGAAG GATCGTACAA TACCGCAACT
TCAGTGATGT ACTTTGGGGG CAGGGCACAG GTCTTTTCAG GAGACAATAC CATTTCCGGA
AATAAAATTG ACTACGATGA AAAGACAAAA CTTGGTGTTG TAACCGGAGA AGTTAAAATT
GAAAATAAAA AAGACAGCAT TACCGTACTT GGGCAGCACG CCAAATACAC AGGAAAGAAC
GGGTATTCAA TCGTTTCCGG AAATCCCTTA ATGTATCAGG TTAATAATAC AGATACGTTA
TTTTTAAAAG CAGATACATT GGTTTCAATT AATGATACCA TTAAAAAAAT AAAATTACTC
AAGGCGTATT ATCATGTGCA GCTTTTCCGT AAAGACATGC AGGCACGGTG TGATTCTCTG
GTATATAATT TTTATGATTC AACCATTTAT TTATATACCA ATCCTGTGTT GTGGAACGGC
GAAAATCAGC TGGTGGCAGA TTCTATCTGG ATGGTTCAGA AAAACGGTAA GATGCATACC
ATGCACATGC ATGTTAATGC ATTCGTGATT TCAAAAGATA CCATTGATAA TTTTAATCAG
ATCAAGGGCC GGCAGATAAC CGCTTTTTTT GCCAATAATC ACATCAGTAA AATTTTAGTG
GAAGGAAATG CAGAAAGTAT TTACCATGCA CTTGAAGGTG AAAAAAAACT GATGGGCGTG
AACAAGGCTG AAGCAGGTTC CATCGTTGTA CTATTTAAAG ATGATAAATT GAGTACCATA
ACCTATGTGA CCAAACCTGA TGCTGCTTTT ATTCCGCCAC AAGAACTTAA ACCTGAGGAT
GTTAAATTGA AGGGTTTTAA ATGGCGGATC AAAGAACGTC CAACCAAGGA GACAGTGATA
GGAACTAATT TAAAATGA
 
Protein sequence
MQHRLNIQFN YFCKMITSMF LRISLIILLV MGFLNGGDCF AQTPSEKIEL IQAGALMGSE 
GKEAYVKLKD HVIFKQGEMF LYCDSAFQYA KTNYVEAFGH VRLVQGDTLT MTCNKLEYDG
NTKKAKAIGD VILIDKQTIL KTTALNYDRE GKNVSYFSGA NISDKGNNLT STIGVYNTGT
KIFTFKKNVH ITNPGQGFLL DADTLQYNSQ SRLATFRGET KITTKDGVIK SKEGSYNTAT
SVMYFGGRAQ VFSGDNTISG NKIDYDEKTK LGVVTGEVKI ENKKDSITVL GQHAKYTGKN
GYSIVSGNPL MYQVNNTDTL FLKADTLVSI NDTIKKIKLL KAYYHVQLFR KDMQARCDSL
VYNFYDSTIY LYTNPVLWNG ENQLVADSIW MVQKNGKMHT MHMHVNAFVI SKDTIDNFNQ
IKGRQITAFF ANNHISKILV EGNAESIYHA LEGEKKLMGV NKAEAGSIVV LFKDDKLSTI
TYVTKPDAAF IPPQELKPED VKLKGFKWRI KERPTKETVI GTNLK