Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3019 |
Symbol | |
ID | 4184952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3460629 |
End bp | 3462206 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638073007 |
Product | hypothetical protein |
Protein accession | YP_679601 |
Protein GI | 110639393 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1452] Organic solvent tolerance protein OstA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAACATA GGTTAAATAT ACAATTTAAT TATTTTTGTA AAATGATTAC ATCCATGTTT CTACGAATAT CTTTAATTAT ACTACTGGTA ATGGGTTTTT TAAATGGAGG CGATTGTTTT GCGCAGACAC CTTCAGAAAA AATCGAATTA ATACAAGCCG GCGCCTTAAT GGGCAGCGAA GGTAAGGAAG CCTATGTAAA ACTAAAGGAT CATGTTATAT TCAAACAGGG AGAAATGTTT TTGTATTGTG ACTCGGCGTT TCAGTATGCA AAGACAAACT ATGTGGAAGC GTTTGGTCAC GTACGCCTGG TACAGGGCGA TACATTAACC ATGACCTGTA ATAAACTGGA ATATGATGGT AACACGAAAA AAGCAAAAGC AATCGGTGAT GTTATATTGA TTGATAAACA AACGATCTTA AAAACAACTG CGTTAAACTA CGATCGTGAA GGTAAAAATG TAAGTTATTT TTCCGGTGCC AATATCAGTG ATAAAGGAAA TAACCTAACC AGTACTATTG GTGTATACAA TACAGGTACA AAAATATTCA CGTTTAAAAA GAACGTACAC ATTACCAACC CCGGACAAGG TTTCCTGCTA GATGCCGATA CGTTGCAATA TAATTCTCAA TCCCGCCTTG CCACGTTTAG GGGCGAAACC AAGATCACCA CAAAAGATGG TGTGATTAAA TCAAAAGAAG GATCGTACAA TACCGCAACT TCAGTGATGT ACTTTGGGGG CAGGGCACAG GTCTTTTCAG GAGACAATAC CATTTCCGGA AATAAAATTG ACTACGATGA AAAGACAAAA CTTGGTGTTG TAACCGGAGA AGTTAAAATT GAAAATAAAA AAGACAGCAT TACCGTACTT GGGCAGCACG CCAAATACAC AGGAAAGAAC GGGTATTCAA TCGTTTCCGG AAATCCCTTA ATGTATCAGG TTAATAATAC AGATACGTTA TTTTTAAAAG CAGATACATT GGTTTCAATT AATGATACCA TTAAAAAAAT AAAATTACTC AAGGCGTATT ATCATGTGCA GCTTTTCCGT AAAGACATGC AGGCACGGTG TGATTCTCTG GTATATAATT TTTATGATTC AACCATTTAT TTATATACCA ATCCTGTGTT GTGGAACGGC GAAAATCAGC TGGTGGCAGA TTCTATCTGG ATGGTTCAGA AAAACGGTAA GATGCATACC ATGCACATGC ATGTTAATGC ATTCGTGATT TCAAAAGATA CCATTGATAA TTTTAATCAG ATCAAGGGCC GGCAGATAAC CGCTTTTTTT GCCAATAATC ACATCAGTAA AATTTTAGTG GAAGGAAATG CAGAAAGTAT TTACCATGCA CTTGAAGGTG AAAAAAAACT GATGGGCGTG AACAAGGCTG AAGCAGGTTC CATCGTTGTA CTATTTAAAG ATGATAAATT GAGTACCATA ACCTATGTGA CCAAACCTGA TGCTGCTTTT ATTCCGCCAC AAGAACTTAA ACCTGAGGAT GTTAAATTGA AGGGTTTTAA ATGGCGGATC AAAGAACGTC CAACCAAGGA GACAGTGATA GGAACTAATT TAAAATGA
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Protein sequence | MQHRLNIQFN YFCKMITSMF LRISLIILLV MGFLNGGDCF AQTPSEKIEL IQAGALMGSE GKEAYVKLKD HVIFKQGEMF LYCDSAFQYA KTNYVEAFGH VRLVQGDTLT MTCNKLEYDG NTKKAKAIGD VILIDKQTIL KTTALNYDRE GKNVSYFSGA NISDKGNNLT STIGVYNTGT KIFTFKKNVH ITNPGQGFLL DADTLQYNSQ SRLATFRGET KITTKDGVIK SKEGSYNTAT SVMYFGGRAQ VFSGDNTISG NKIDYDEKTK LGVVTGEVKI ENKKDSITVL GQHAKYTGKN GYSIVSGNPL MYQVNNTDTL FLKADTLVSI NDTIKKIKLL KAYYHVQLFR KDMQARCDSL VYNFYDSTIY LYTNPVLWNG ENQLVADSIW MVQKNGKMHT MHMHVNAFVI SKDTIDNFNQ IKGRQITAFF ANNHISKILV EGNAESIYHA LEGEKKLMGV NKAEAGSIVV LFKDDKLSTI TYVTKPDAAF IPPQELKPED VKLKGFKWRI KERPTKETVI GTNLK
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