| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3005 |
|---|
| Symbol | |
|---|
| ID | 4183738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 3447064 |
|---|
| End bp | 3448488 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638072994 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_679588 |
|---|
| Protein GI | 110639379 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.033687 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.434063 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATACA ATTCAATTCT GTTTCTAATC GCGGCTTCAA TTATTGCGAT GATTTTTTGG
ATATTGGTTG ACAATACCTA TGATGCGGGA GATAGTATCA CACATTATGC AATTGCACAT
TATTCCTGGA GACATCCCTA TCTACTCTTT GATAACTGGG GTAAGCCGGT ATTCACCATT
CTATCTTCTC CGTTTGCACA ATTTGGATGG AAAGGCATTA CGTTTTTTAA TTCATGTACA
GGTATACTAG CCTGCTGGCT GATTGCTGAA ATAATACACA AATTAAAATG GCGTGTTTCA
CCTTATGCAG CATTGCTGTT GTTTTTTATA CCAAACTATC CATTGGCCTT GAACTCCGGA
TTAACAGAGC CCTTATATGC ATTGCTGCTT ACCTTAACCG TTTATTATAG TGTTGTCGGG
AAATACATGT TAAGTGCAAT CGCCATATCT TTCCTGCCGT TTGTTAGAAG TGAAGGATTT
ATTTCAATAA TGGTTGTTGC CGTTTTTTTT ATTGCCTCAA GTAAATGGAA AGAAATACTC
TACATGCTTA CAGGTACACT TTGTATTTCG GTTGCAGGAA TGTTTGTTCA CGATAAAAAT
ATTCTATGGG TATTTTCTAC AAACCCCTAT GCCGTTAGTC AGCCGGTTGA TACCTATGGG
GCCGGTGCGT GGAGTGATTA TTTTAGTAAG CTTTACTACA TGACAGGTAT TCCTTTTACG
GCCTTGTTCT GGATCGCGTC GATTGTTCTT ACAATCATTC TGATTAAAAA AATCGGAAGT
AGCCTTAAAA CAGCGATCGT AAGTACAGAA TATTTATTGC TCGGATTGTT TTTTTCGTTT
TTCCTGGCTC ACGTTGTATT CTGGAAGTTT GGTTTGTTCA ACTCATTTGG CATGAGCCGG
GTACTGATTT CAATCGTACC GATTGGTTTA CTAATGGTCT GTTATTTATT TGACTGGTTG
CTGGTATACT CCGATAAAAA CATACTGACT GCCGGAATCT GTGCTTTTGT ATGCGTATTG
TTTCCTTTCC TGAATAATAA AAGTGCGTGG AATTTTTCGA AAGAATTTAA AGAAGATGCT
GAAATAGCAG AAATTAAAAA GATTTCAAGT GATATTAGGA TTGATACGTT TCAAACCGAT
AGAATATATT ATACATCTAC TCCTTTGATG GTTTTATTAA AATGTGATAT TTATGATACA
TGTAAATATA AATTGATCAA TAAATTTAAA AAAGATATAA AACCAGGTTA TAGCTATATT
GTTGTAAAAG ATCAGTGGTC CATGAAAATG GAAAGCACGA TTATGAATGA GGATCTGATT
TTTGCGGGTG TTAAAAAGAT TTATTCAAGA CAACTTTCGG AAACAAATTC AGTTGATATT
TATTCAAGTG ATCAGAATGC TGCGGTATAC AGAACAGGAA AGTAG
|
|---|
| Protein sequence | MRYNSILFLI AASIIAMIFW ILVDNTYDAG DSITHYAIAH YSWRHPYLLF DNWGKPVFTI
LSSPFAQFGW KGITFFNSCT GILACWLIAE IIHKLKWRVS PYAALLLFFI PNYPLALNSG
LTEPLYALLL TLTVYYSVVG KYMLSAIAIS FLPFVRSEGF ISIMVVAVFF IASSKWKEIL
YMLTGTLCIS VAGMFVHDKN ILWVFSTNPY AVSQPVDTYG AGAWSDYFSK LYYMTGIPFT
ALFWIASIVL TIILIKKIGS SLKTAIVSTE YLLLGLFFSF FLAHVVFWKF GLFNSFGMSR
VLISIVPIGL LMVCYLFDWL LVYSDKNILT AGICAFVCVL FPFLNNKSAW NFSKEFKEDA
EIAEIKKISS DIRIDTFQTD RIYYTSTPLM VLLKCDIYDT CKYKLINKFK KDIKPGYSYI
VVKDQWSMKM ESTIMNEDLI FAGVKKIYSR QLSETNSVDI YSSDQNAAVY RTGK
|
|---|
| |