Gene CHU_3004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3004 
Symbol 
ID4183737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3445732 
End bp3447051 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content36% 
IMG OID638072993 
Producthypothetical protein 
Protein accessionYP_679587 
Protein GI110639378 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.104415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.411209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACAC CGTCACTTAA AAAAAGCTTA TTCTGGACTG TACTCAGTTT GTTTGTGCTG 
CATCTTTGTG TAATTGGCAA TACACAAAGC GGACGTGATA ATTATAAGGA TATATTAGAA
GTTGATGCTG TTGGGTATTA TTCCTTTTTA CCTGCATTCT TTGAATATAA CGACCCTAAT
TTTACTTTTT TAGATAAAAT TGAAAATCCA TTTATTTCAG GTGCAACCTC ATTGGTTCGC
GTGCCAACTG AAAGAGGGAA CATCGACAGA TATTTTATAG GAACCTCCAT CCTGATGGCT
CCTTTTTATC TTGCCGCAAC ATGTTTTTCT GATCCGCAGG ATGGCTATGG CAAATATCAA
TTGTTATCCA TCAGCATCGC AGCATCTTTT TATTTGTATG CCGCATTTTT CCTTATTGGG
TTATTTTTAA AAAATCAATT TCACCTGCAT CAAAAAACAC TTATCATCAC CATTATAAGT
TTTGCACTGG GAACAAATTT GTTTTATTAC AGTATTTTTG AACCGGGTAT GAGTCACATT
TACAGCTTCT TTATGGTTGC TGTTTTTTTT ACCTGCTGGC AAAAACTTGC TGTAACCCAA
AAGTATATAT ACTTTCTGTT TGCCGCCCTG GCATTGGGTC TGATAACAAT TATACGACCT
GTAAATTTAC TTATCGTACT TTGTCTTCCA TTGATCTGGC CCAACGTACT GGTTCATGTT
ATTCAGGATT TATTTTCTAA AAAAATCCCT TTCCTTGTAA GCGGTATTAT GTTATTCAGT
GCGACTATTT TTATTCAGTT GCTTTATTAT AAACTGGCAA TTGGCGCCTG GTTCATTTAT
TCTTATAAAG AAGAAGGTTT TGATTTCACT TCTCCTCATA TTACAGATGT GTTATTCAGT
TACCGAAAGG GATTGTTTGT TTACATGCCT ATGTTGTTTG TTGCCTTAGC CGGCATCTAT
TACTGGTCAC GGAAACAAAC GTTTCTATAC GGCAGATGGC TTATCTCCTT TGCACTGATT
GTTTTTGTTT TATCGAGCTG GTCAAGCTGG GCATATGGCG GCTGTTTTGG AAACAGGGCT
TTTATTGAAT ATTATATGTT GTTTATTATT CCTTTTGCCT TACTGGTTGA ACATACAACT
TCTCCTAAAA TACTGTATGC TGTAATTGCC GCACTCATTC TACTCTGTCA GATTCAAACC
TATCAATACA GATATGCCTA CATCCACTGG GATGAAATGA ACAAAGAAAA ATACTGGAAA
GTTTTTCTGC GTGTAGATTA CCTGATCAAT AAAAAACCGG TTCATGAGAT TTATAAATAA
 
Protein sequence
MQTPSLKKSL FWTVLSLFVL HLCVIGNTQS GRDNYKDILE VDAVGYYSFL PAFFEYNDPN 
FTFLDKIENP FISGATSLVR VPTERGNIDR YFIGTSILMA PFYLAATCFS DPQDGYGKYQ
LLSISIAASF YLYAAFFLIG LFLKNQFHLH QKTLIITIIS FALGTNLFYY SIFEPGMSHI
YSFFMVAVFF TCWQKLAVTQ KYIYFLFAAL ALGLITIIRP VNLLIVLCLP LIWPNVLVHV
IQDLFSKKIP FLVSGIMLFS ATIFIQLLYY KLAIGAWFIY SYKEEGFDFT SPHITDVLFS
YRKGLFVYMP MLFVALAGIY YWSRKQTFLY GRWLISFALI VFVLSSWSSW AYGGCFGNRA
FIEYYMLFII PFALLVEHTT SPKILYAVIA ALILLCQIQT YQYRYAYIHW DEMNKEKYWK
VFLRVDYLIN KKPVHEIYK