Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3003 |
Symbol | |
ID | 4183736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3444935 |
End bp | 3445657 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638072992 |
Product | b-glycosyltransferase |
Protein accession | YP_679586 |
Protein GI | 110639377 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00616181 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0256653 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCAGA TTAAAACGCT TTCTATTGTA ATTCCTGCAT ATAATGAAGA ACGCACGATT CATTTAATTC TTAATAAAGT TTTGGATGTA ACGCTTGTTA ATGATATTCA AAAGGAAATA ATTTTAGTGA ATGACTGTTC AAAAGACAAT ACAAAATCAA CAATAGAAAA ATATATTAAT GATCATCCCG GTCACAATAT CGTTTTATAT AATCATGAAG TAAACAAAGG AAAAGGGGCA GCGTTACATA CCGGGATCGA AAAGGCTCAG GGGGAAGTTG TCATTATTCA GGATGCCGAT CTGGAATACG ATCCAAGAGA ATACAACATT CTTTTACAGC CAATCCTTGA AGATTTTGCA GACGTTGTTT ATGGCTCCCG TTTTATCGGT GGGCGCCCGC ATAGAATTTT ATTTTTCTGG CATACCATTG GAAATAAAAT GTTAACGTTT GCCAGCAACA TGTTCACCAA TCTGAATCTT ACAGATATGG AAACGTGTTA CAAAGTATTT AAAAGCGATA TCATTAAAAA AATTGCACTT AAAGAAAAAC GTTTTGGTTT TGAACCTGAA GTAACGGCAC GTATTTCGCA AATCCCAAAC ATCCGTATTT ACGAAGTAGG TATCTCCTAC TATGGCAGAA CATACGAAGA AGGTAAAAAG ATCGGAATGA AAGATGCATT CAGAGCCTTA TTCTGTATTA TCAAATATAA CTTATTCAAA TAG
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Protein sequence | MSQIKTLSIV IPAYNEERTI HLILNKVLDV TLVNDIQKEI ILVNDCSKDN TKSTIEKYIN DHPGHNIVLY NHEVNKGKGA ALHTGIEKAQ GEVVIIQDAD LEYDPREYNI LLQPILEDFA DVVYGSRFIG GRPHRILFFW HTIGNKMLTF ASNMFTNLNL TDMETCYKVF KSDIIKKIAL KEKRFGFEPE VTARISQIPN IRIYEVGISY YGRTYEEGKK IGMKDAFRAL FCIIKYNLFK
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