Gene CHU_3001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3001 
Symbol 
ID4183734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3441914 
End bp3443641 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content33% 
IMG OID638072990 
Producthypothetical protein 
Protein accessionYP_679584 
Protein GI110639375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0634001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAACA AAACGCTTAC CAATACTGTA GTTATTTCAT TTTATACACT GCTGAGCATT 
TTTTTTACAT GGCCTCTTTT AGTACACCTT CATGAGGGAT TTATTTCTCC GGATACAATG
GGAGATTCAT CTTCCTATAT CTGGGATGTA TATATTTTCA AAAATAATAT AGCCAACAAC
AACCCGTTGT TTCATACTGA AAAAGTATTG TCTCCTATTG GTGGTAATTT ATGGATGCAT
GGCTACATGC CCGGCATGTG CAGCTTTTCA CTCTTATTTA AAAATAATTT TCTGGGCATG
AATCTGTATA TCATGCTCCA TTTTATTCTG TCTGCCTTTG GAGCGTATCT GCTTTCCATG
TATCTGAATA AAAACAAACT CATTTCATTT ATTATTGGTG CAGCATTTTC ATTTTCTGCA
TACAAAATGC TTCGGTTAAC CGAACATTAT ACACTTGTGC TTACAGCAAC GATTCCATTT
TACATACTTT GTTTTTTAAA AGCATTTGAT TTTTCAACCA AATCATTTCT ACCCGTAATC
ATTTCTAAAA AACATTTTTA TTTGTGTATT CTGCTTGGAT TCTTAACCAT TTTAAATGAC
TACTATGCAA CATTCTATTT GCTTTATTTT TCATTCGCCT GGTTTGCTTT TTATAAATTT
TACCCATACT GGATCAACTT ATCGCGTATA AAAAAAACAG GTATGTTGCT TATATTATTT
ATTGGCATGC ATTTAATTAT CGAACCGCTG GTAATACATG GTTTCGACGA CAAAGGCGGT
ATTTGGTGGG GAGGAAATAT GCTTGCATTT TTTATTCCCA ACGACAATTC CTGGCTCTAT
AACAATGCCT CTCTTGAGCC ACTAACATCC ATTGCTTACA GAGGCATGCA TAATTTAGAA
AATCAGCTCT TTTTAGGGTA CAGCATTATA TTTGTGGGCA TTATTCTTCT ATACAATTTC
TTTAAAAACA ACCTGCCTAA AGAAACAGCT CCGTGGATTT TCATAACCGC AATATTTTTT
TTACTTGCAA CTCCAATCAT TTATTTCGGT TCGCATAAAA TAATTTATAG CCCTACGGCC
ATCATCCACT TCATTCCGTT CTTTAATAAT ATCCGTTGTA ATACCCGCAC GGTTATGATG
ATTGAACTTA CGTTACCAAT TATTGCCGGT TATTTTTGGG CACAAACAAT TGCCCGCAAA
CCAAATATTC TGTATAGTTA CGCATTACCC GTATTGTTGC TTTTTTATAT GATTGTAGAG
TTTAAACCTA AACCTTATAA CTTACTTGTA AATGCAGATG CCCCGGCAAT CTATGATGCT
GTAGCAAAAA GCCCCAATAA TAAAGTTTTA ATTATGCCTA CAGGTGTGAA TGATGGACTG
CACCACATAG GCAATTTTAA TAACCTGGAA CATTTTTATC AAACCATTCA CAAAAAAAGT
ATCACGGGCG GATATCTTTC AAGAGTTTCT GACAAAGTAT TTGAAAGCTA TCAAAACGAT
TCCATCATGA ATACGTTGAT TCTGTTAAGT GAAAATGCGA ATTATCCATT CTCTATACCG
AGCCAGAGCC AGATTACGAC ATTTAACAAC ACATTTAACG TAGATATGTA TTTGATTAAG
CCAGACTATA TCAATACAAA TGCTGAAAAA TATATTATTG TTTTATTGAA AGGAAAATCT
TTTGTAATAA CTGAAAAAGA TGGATTTAAA TTGTATGAAT TAAAATAA
 
Protein sequence
MLNKTLTNTV VISFYTLLSI FFTWPLLVHL HEGFISPDTM GDSSSYIWDV YIFKNNIANN 
NPLFHTEKVL SPIGGNLWMH GYMPGMCSFS LLFKNNFLGM NLYIMLHFIL SAFGAYLLSM
YLNKNKLISF IIGAAFSFSA YKMLRLTEHY TLVLTATIPF YILCFLKAFD FSTKSFLPVI
ISKKHFYLCI LLGFLTILND YYATFYLLYF SFAWFAFYKF YPYWINLSRI KKTGMLLILF
IGMHLIIEPL VIHGFDDKGG IWWGGNMLAF FIPNDNSWLY NNASLEPLTS IAYRGMHNLE
NQLFLGYSII FVGIILLYNF FKNNLPKETA PWIFITAIFF LLATPIIYFG SHKIIYSPTA
IIHFIPFFNN IRCNTRTVMM IELTLPIIAG YFWAQTIARK PNILYSYALP VLLLFYMIVE
FKPKPYNLLV NADAPAIYDA VAKSPNNKVL IMPTGVNDGL HHIGNFNNLE HFYQTIHKKS
ITGGYLSRVS DKVFESYQND SIMNTLILLS ENANYPFSIP SQSQITTFNN TFNVDMYLIK
PDYINTNAEK YIIVLLKGKS FVITEKDGFK LYELK