Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3001 |
Symbol | |
ID | 4183734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3441914 |
End bp | 3443641 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638072990 |
Product | hypothetical protein |
Protein accession | YP_679584 |
Protein GI | 110639375 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0634001 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAACA AAACGCTTAC CAATACTGTA GTTATTTCAT TTTATACACT GCTGAGCATT TTTTTTACAT GGCCTCTTTT AGTACACCTT CATGAGGGAT TTATTTCTCC GGATACAATG GGAGATTCAT CTTCCTATAT CTGGGATGTA TATATTTTCA AAAATAATAT AGCCAACAAC AACCCGTTGT TTCATACTGA AAAAGTATTG TCTCCTATTG GTGGTAATTT ATGGATGCAT GGCTACATGC CCGGCATGTG CAGCTTTTCA CTCTTATTTA AAAATAATTT TCTGGGCATG AATCTGTATA TCATGCTCCA TTTTATTCTG TCTGCCTTTG GAGCGTATCT GCTTTCCATG TATCTGAATA AAAACAAACT CATTTCATTT ATTATTGGTG CAGCATTTTC ATTTTCTGCA TACAAAATGC TTCGGTTAAC CGAACATTAT ACACTTGTGC TTACAGCAAC GATTCCATTT TACATACTTT GTTTTTTAAA AGCATTTGAT TTTTCAACCA AATCATTTCT ACCCGTAATC ATTTCTAAAA AACATTTTTA TTTGTGTATT CTGCTTGGAT TCTTAACCAT TTTAAATGAC TACTATGCAA CATTCTATTT GCTTTATTTT TCATTCGCCT GGTTTGCTTT TTATAAATTT TACCCATACT GGATCAACTT ATCGCGTATA AAAAAAACAG GTATGTTGCT TATATTATTT ATTGGCATGC ATTTAATTAT CGAACCGCTG GTAATACATG GTTTCGACGA CAAAGGCGGT ATTTGGTGGG GAGGAAATAT GCTTGCATTT TTTATTCCCA ACGACAATTC CTGGCTCTAT AACAATGCCT CTCTTGAGCC ACTAACATCC ATTGCTTACA GAGGCATGCA TAATTTAGAA AATCAGCTCT TTTTAGGGTA CAGCATTATA TTTGTGGGCA TTATTCTTCT ATACAATTTC TTTAAAAACA ACCTGCCTAA AGAAACAGCT CCGTGGATTT TCATAACCGC AATATTTTTT TTACTTGCAA CTCCAATCAT TTATTTCGGT TCGCATAAAA TAATTTATAG CCCTACGGCC ATCATCCACT TCATTCCGTT CTTTAATAAT ATCCGTTGTA ATACCCGCAC GGTTATGATG ATTGAACTTA CGTTACCAAT TATTGCCGGT TATTTTTGGG CACAAACAAT TGCCCGCAAA CCAAATATTC TGTATAGTTA CGCATTACCC GTATTGTTGC TTTTTTATAT GATTGTAGAG TTTAAACCTA AACCTTATAA CTTACTTGTA AATGCAGATG CCCCGGCAAT CTATGATGCT GTAGCAAAAA GCCCCAATAA TAAAGTTTTA ATTATGCCTA CAGGTGTGAA TGATGGACTG CACCACATAG GCAATTTTAA TAACCTGGAA CATTTTTATC AAACCATTCA CAAAAAAAGT ATCACGGGCG GATATCTTTC AAGAGTTTCT GACAAAGTAT TTGAAAGCTA TCAAAACGAT TCCATCATGA ATACGTTGAT TCTGTTAAGT GAAAATGCGA ATTATCCATT CTCTATACCG AGCCAGAGCC AGATTACGAC ATTTAACAAC ACATTTAACG TAGATATGTA TTTGATTAAG CCAGACTATA TCAATACAAA TGCTGAAAAA TATATTATTG TTTTATTGAA AGGAAAATCT TTTGTAATAA CTGAAAAAGA TGGATTTAAA TTGTATGAAT TAAAATAA
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Protein sequence | MLNKTLTNTV VISFYTLLSI FFTWPLLVHL HEGFISPDTM GDSSSYIWDV YIFKNNIANN NPLFHTEKVL SPIGGNLWMH GYMPGMCSFS LLFKNNFLGM NLYIMLHFIL SAFGAYLLSM YLNKNKLISF IIGAAFSFSA YKMLRLTEHY TLVLTATIPF YILCFLKAFD FSTKSFLPVI ISKKHFYLCI LLGFLTILND YYATFYLLYF SFAWFAFYKF YPYWINLSRI KKTGMLLILF IGMHLIIEPL VIHGFDDKGG IWWGGNMLAF FIPNDNSWLY NNASLEPLTS IAYRGMHNLE NQLFLGYSII FVGIILLYNF FKNNLPKETA PWIFITAIFF LLATPIIYFG SHKIIYSPTA IIHFIPFFNN IRCNTRTVMM IELTLPIIAG YFWAQTIARK PNILYSYALP VLLLFYMIVE FKPKPYNLLV NADAPAIYDA VAKSPNNKVL IMPTGVNDGL HHIGNFNNLE HFYQTIHKKS ITGGYLSRVS DKVFESYQND SIMNTLILLS ENANYPFSIP SQSQITTFNN TFNVDMYLIK PDYINTNAEK YIIVLLKGKS FVITEKDGFK LYELK
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