| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3000 |
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| Symbol | wecE |
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| ID | 4183733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3440685 |
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| End bp | 3441818 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638072989 |
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| Product | TDP-4-oxo-6-deoxy-D-glucose transaminase |
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| Protein accession | YP_679583 |
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| Protein GI | 110639374 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | [TIGR02379] TDP-4-keto-6-deoxy-D-glucose transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.131906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCCCTT TTAATAAACC GCATTTAACA GGTAAAGAAG TTCATTACAT CTATGAGGCT
GTTCATTCAG GGAAAATTTC AGGAAATGGC ATTTTTACTA AAAAATGTCA TGATTTCTTT
ACTTCCACAT ACGGTTTCAC AAAGACATTG ATGACATCAA GCTGTACAGA TGCGCTGGAA
ATGTCGTCAT TGTTAATGGA TATTCAACCG GGGGATGAAA TTATATTACC AACGTTTACG
TTTGTTTCAA CGGCAAACGC TTTTGTATTA AGAGGCGCAA AGCTTGTATT TGTAGATAGT
TTAGCAACTG AACCAAATAT GAACGTTGAG TTGATTGAAG GTCTGATCAC ATCTAAAACA
AAGGCGATTG TTGTGGTGCA TTATGCCGGC GTAGCGTGTG ATATGGATGT TGTAATGAAC
ATTGCAAAAA AATATCAGTT ATTCGTAGTG GAAGATGCCG CGCAGGCAAT AAGCTCCTAT
TATAAAGATA AACCATTGGG CGGCATTGGC GATTTTGGTG CATTCAGTTT TCATGAAACA
AAAAATATCA TTTCCGGAGA AGGCGGACTG TTGGCAATAA ACAATTCAGA TTATTGTAAC
AGGTCTGAAA TTATCTGGGA AAAAGGTACA AACCGTAGCG CTTTTTTTAG AGGCGAAACA
GATAAGTATG GTTGGGTAGA TGTTGGTTCC TCGTTTTTAC CATCTGAAAT TATAAGCGCC
TTTTTATATG CGCAGTTAGA AAACGTAGCT GAAATTCAGG CTAAGCGACT GGAAATCTGG
AATACCTATT ACAATACACT AAGCCCCTTA GCGGAACATA AAAAACTCAG GTTGCCTTAT
ATACCGGCGT ATGCAACCAA CAACGCACAT ATGTTTTATG TGATCTGCAA TTCTCTGGAA
GAGCGGACCG CATTGATTGA TTATTTAAAA GCACATAATA TTCTGGCTGT GTTTCATTAT
TTATCGCTTC ATAAATCACC TTACTTTTCA GATAAACACG ATGGAAGATC GATGGATTAT
GCAGATCAGT ATGCAGAAAC GTTGGTTCGG TTGCCCTTGT TTTATGATCT TTCCACCGAA
GATCAGGAAT TTATTTGTAC TAAAATCTTA TCTTTTTATT CAGAAAAAAT ATGA
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| Protein sequence | MIPFNKPHLT GKEVHYIYEA VHSGKISGNG IFTKKCHDFF TSTYGFTKTL MTSSCTDALE
MSSLLMDIQP GDEIILPTFT FVSTANAFVL RGAKLVFVDS LATEPNMNVE LIEGLITSKT
KAIVVVHYAG VACDMDVVMN IAKKYQLFVV EDAAQAISSY YKDKPLGGIG DFGAFSFHET
KNIISGEGGL LAINNSDYCN RSEIIWEKGT NRSAFFRGET DKYGWVDVGS SFLPSEIISA
FLYAQLENVA EIQAKRLEIW NTYYNTLSPL AEHKKLRLPY IPAYATNNAH MFYVICNSLE
ERTALIDYLK AHNILAVFHY LSLHKSPYFS DKHDGRSMDY ADQYAETLVR LPLFYDLSTE
DQEFICTKIL SFYSEKI
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