| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2996 |
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| Symbol | dxr |
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| ID | 4183729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3436304 |
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| End bp | 3437479 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638072985 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_679579 |
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| Protein GI | 110639370 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACC CTCAAAAAAA ATACATTGCC ATTCTTGGAT CTACCGGTTC AATCGGCACA
CAGGCCCTTG AAGTTATCCG GAATAATAAA GATCGGTTTG TGGTTGAAGT GTTAACAGCA
GAAAATAATG CAGCGCTGCT TATAGAGCAG GCCGTTGAAT TTCGCCCCAA TGTAGTTGTC
ATTGGAAATG AGGGGCTCTA TTCAAACGTT CAGCATGCCT TAGAGCCGCT GGATATAAAG
GTGTATTGCG GAGTCAAAGC GCTGGCTTCA GTTGTTGAGA TGGAAGATAT CGATGTTGTA
TTGACCGCAT TGGTCGGTTA TGCCGGTTTA ATTCCAACGA TACATGCCAT CAAAGCAGGC
AAGCACATTG CCCTGGCAAA TAAAGAAACG CTTGTTGTTG CGGGTGATAT CGTTACGGCA
TTAGCCAGAC AGCATCGGGT AGCGATCCTG CCGGTTGATT CTGAACATTC AGCCATTTTT
CAGTGTTTGC CTGGAGAGGG AATGAATGAA ATTGAGAAGA TTATTCTGAC AGCTTCCGGT
GGTCCGTTCA GAGGCATGAA ACGTGCAGAT CTGGAGCATG TAACTAAAAA ACAAGCCTTA
AAGCATCCCA ACTGGAGCAT GGGCGCTAAA ATAACGATTG ATTCGGCTTC CTTGATGAAT
AAAGGCTTGG AGGTTATTGA AGCGAAATGG TTATTTGGTC TGGAAGCCGA TCAGATTGAT
GTTGTTGTGC ATCCTCAGTC GATCATACAT TCCATGGTAC AGTTTCAGGA TGGTTCCATT
AAAGCACAGA TGGGGCTGCC GGATATGAAA TTACCGATAC AGTATGCGCT GGCTTTTCCT
GAACGGTTAA AGTCCGATTA TCCGAGGTTT GATTTTACAC AATATCCGGC CCTTACCTTT
GACAAACCTG ATACGGAAAC ATTTCATAAT TTATCATTAG CCTATGATGC CTTGCGAAAA
GGAGGGAATA TGGCCTGTAT TTTAAATGCT GCTAATGAGA TCGCTGTTGA AAAATTCCTG
CAGGATGAGA TAGCATTTTT AGAAATGCCT GATTTGATTG CTGAATGTAT GGCAAAAGTA
CCGTATATTG TTGTTCCGAC GCTGGATGAT TACATTCAGA CAGATACACA GACAAGAGCG
TTGGCGCGTG CATACACGCA GGTAAAAGTT AAATAA
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| Protein sequence | MKDPQKKYIA ILGSTGSIGT QALEVIRNNK DRFVVEVLTA ENNAALLIEQ AVEFRPNVVV
IGNEGLYSNV QHALEPLDIK VYCGVKALAS VVEMEDIDVV LTALVGYAGL IPTIHAIKAG
KHIALANKET LVVAGDIVTA LARQHRVAIL PVDSEHSAIF QCLPGEGMNE IEKIILTASG
GPFRGMKRAD LEHVTKKQAL KHPNWSMGAK ITIDSASLMN KGLEVIEAKW LFGLEADQID
VVVHPQSIIH SMVQFQDGSI KAQMGLPDMK LPIQYALAFP ERLKSDYPRF DFTQYPALTF
DKPDTETFHN LSLAYDALRK GGNMACILNA ANEIAVEKFL QDEIAFLEMP DLIAECMAKV
PYIVVPTLDD YIQTDTQTRA LARAYTQVKV K
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