Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2970 |
Symbol | |
ID | 4186354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3400316 |
End bp | 3401101 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638072957 |
Product | hypothetical protein |
Protein accession | YP_679553 |
Protein GI | 110639344 |
COG category | [S] Function unknown |
COG ID | [COG1912] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00085144 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCTATTA TTACTTTTAT GTCCGATTTT GGCTGGCGCG ATCCCTATGT GGCATCGATC AAGGCAAAAA TTTTATCGGT CAACCATACC ATGCAGATCG TTGATATCAC GCACGAGATC GAGCACTTTA ATATTCCGCA TGCGGCCTAT GTGATGCGCA ACATCTTCCG CGATTTTCCC AAGGGCAGCG TGCACCTGGT GTGCGTAAAC ACCCCGGCTT CGGGCAAAGA AAAACTTGTG GCCATAAAGC TTGAAGAACA TTATTTTGTG GGCATCGACA ACGGTTTTTT CTCCCTGCTG AGCGATAAGC AGCCGTCTAC TATTATTGAA TTGCGGAAAG ACGATAAATA TTCGGCCATT TTTCCGGAAC GCAGCACACT GGCAACCACG GCTGTAGCCT TAGCGAGCGG CGGTTCCATC TACAACATGG GTATAGAGCT CAAGGCGTTG GCCAGTATGA TGCTGCCGCA GGTGAAAGTA ACCAAAAGCC AGATCTGGGG GCGTGTGGTG CATGTAGATA ATTACGGCAA CCTCATTACC AATATTACCC GCGAAATGTT TGACCGGGTG CACGAAGGCC GGCCGTATTC GGTGCTGTTT TCCCGCGAGC AGGTAGAGGT TATCTCAACT TCCTATAACT CGGTGGAAAG CGGGGAGTGC GTAGCGGTGT TCAACAGCAG CGGCAACCTC GAAGTAGCCA TCTGCCACGG CAACGCCGCG GAACTGCTGG GTTTGCAGTA TGACAGCCAG GTGCAGATTA AGTTCAGTGA AAGTACTGTG TTTTAA
|
Protein sequence | MAIITFMSDF GWRDPYVASI KAKILSVNHT MQIVDITHEI EHFNIPHAAY VMRNIFRDFP KGSVHLVCVN TPASGKEKLV AIKLEEHYFV GIDNGFFSLL SDKQPSTIIE LRKDDKYSAI FPERSTLATT AVALASGGSI YNMGIELKAL ASMMLPQVKV TKSQIWGRVV HVDNYGNLIT NITREMFDRV HEGRPYSVLF SREQVEVIST SYNSVESGEC VAVFNSSGNL EVAICHGNAA ELLGLQYDSQ VQIKFSESTV F
|
| |