Gene CHU_2970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2970 
Symbol 
ID4186354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3400316 
End bp3401101 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content50% 
IMG OID638072957 
Producthypothetical protein 
Protein accessionYP_679553 
Protein GI110639344 
COG category[S] Function unknown 
COG ID[COG1912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00085144 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTATTA TTACTTTTAT GTCCGATTTT GGCTGGCGCG ATCCCTATGT GGCATCGATC 
AAGGCAAAAA TTTTATCGGT CAACCATACC ATGCAGATCG TTGATATCAC GCACGAGATC
GAGCACTTTA ATATTCCGCA TGCGGCCTAT GTGATGCGCA ACATCTTCCG CGATTTTCCC
AAGGGCAGCG TGCACCTGGT GTGCGTAAAC ACCCCGGCTT CGGGCAAAGA AAAACTTGTG
GCCATAAAGC TTGAAGAACA TTATTTTGTG GGCATCGACA ACGGTTTTTT CTCCCTGCTG
AGCGATAAGC AGCCGTCTAC TATTATTGAA TTGCGGAAAG ACGATAAATA TTCGGCCATT
TTTCCGGAAC GCAGCACACT GGCAACCACG GCTGTAGCCT TAGCGAGCGG CGGTTCCATC
TACAACATGG GTATAGAGCT CAAGGCGTTG GCCAGTATGA TGCTGCCGCA GGTGAAAGTA
ACCAAAAGCC AGATCTGGGG GCGTGTGGTG CATGTAGATA ATTACGGCAA CCTCATTACC
AATATTACCC GCGAAATGTT TGACCGGGTG CACGAAGGCC GGCCGTATTC GGTGCTGTTT
TCCCGCGAGC AGGTAGAGGT TATCTCAACT TCCTATAACT CGGTGGAAAG CGGGGAGTGC
GTAGCGGTGT TCAACAGCAG CGGCAACCTC GAAGTAGCCA TCTGCCACGG CAACGCCGCG
GAACTGCTGG GTTTGCAGTA TGACAGCCAG GTGCAGATTA AGTTCAGTGA AAGTACTGTG
TTTTAA
 
Protein sequence
MAIITFMSDF GWRDPYVASI KAKILSVNHT MQIVDITHEI EHFNIPHAAY VMRNIFRDFP 
KGSVHLVCVN TPASGKEKLV AIKLEEHYFV GIDNGFFSLL SDKQPSTIIE LRKDDKYSAI
FPERSTLATT AVALASGGSI YNMGIELKAL ASMMLPQVKV TKSQIWGRVV HVDNYGNLIT
NITREMFDRV HEGRPYSVLF SREQVEVIST SYNSVESGEC VAVFNSSGNL EVAICHGNAA
ELLGLQYDSQ VQIKFSESTV F