| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2965 |
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| Symbol | |
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| ID | 4186350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 3396476 |
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| End bp | 3397087 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638072952 |
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| Product | sigma 24 related |
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| Protein accession | YP_679549 |
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| Protein GI | 110639340 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00314986 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000799779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | GTGCCACCTA ATGGCATTAA AAAAACATAT TTTATAAAAC ATAATTCGCA CCATTTCGTT
GGACCGACCA TGAGATTAGA AAAAACCGAA ACCGAATTAC TTGAAATGTA TTGCAAGGGT
TGCAATGACA GCTTAGCTAT TATTTACAGC CAATATTGGG GGCTATTTAA AAGTGTATCA
AAAAAATATT TGTGCAATGA TGATTGTGAA GACCTTATTC ATTCTGTTAT TGAAAAACTA
TTGCTCATGC CTATAGAAAA GAGAATATTA CAATTCTCTA ATATAAGGTC TATCAAAAGC
TTTTTTTATG TTATGATAAA GAATGCTTCA CTTGATTATC TAAGAAAGCG GCGACTTAAT
TGTGTGAATA TTGAATATGC AGCACATTCA CATGAAGAGC AGAATAGTGA TTCTTATTTA
GTGTTGGAAT ATAAAAATGT AGGATTGTCA GTAACTGAGA TGAAAATTTT CGAGGAGTAT
ATCAATGGTC TCAAACCCAA AGCAATTGCC TCTCAACACC AAAAGGCTGT TTCCACTATA
AAAAACATAT TAAATAATTC TAAACGCAAG ATTCTTCGGT ACTATAAAGA GAATGCTTAT
TTGTTAGAGT AA
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| Protein sequence | MPPNGIKKTY FIKHNSHHFV GPTMRLEKTE TELLEMYCKG CNDSLAIIYS QYWGLFKSVS
KKYLCNDDCE DLIHSVIEKL LLMPIEKRIL QFSNIRSIKS FFYVMIKNAS LDYLRKRRLN
CVNIEYAAHS HEEQNSDSYL VLEYKNVGLS VTEMKIFEEY INGLKPKAIA SQHQKAVSTI
KNILNNSKRK ILRYYKENAY LLE
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