Gene CHU_2960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2960 
Symbol 
ID4186345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3392683 
End bp3393336 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content33% 
IMG OID638072947 
ProductDNA resolvase 
Protein accessionYP_679544 
Protein GI110639335 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000168825 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000591562 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAATAGAT TAGTAATCTT AGCGAGGGTA TCAACGAGTA AACAAGACAC AGAACGTCAG 
TTGAGTGATT TAAATGAAGT TTGCACAAGA AATCAATACG ATTTAGTAAA TACTTTTACT
GAAACAGTAA GCGGTAAATA TGGCATTACA GAGCGGACAA CTCTTCAAGC CATTATTAAA
ATGGCAGAGT TGAAGCAATT TGATAAGCTT CTTGTATCAG AGGTTTCTCG TATTGGTAGG
AAGACGAGTG AAGTTTTAAA ATTCATCGAG ATTTTAACTG AAAGAAAAAT TTCGATTTAT
ATTCACAATT ATGGATTGGA AACATTAGAT AGAAATTTGA ATCAAAATCC ATTAATCGGC
ATGATGATAA ATTTTCTATC TTCCTTTTCC GATATGGAGC GAACACTAAC TATCAGCCGT
GTCAAAAGTG GTCTAGAAGA AGCTCGTAGA CGTAACGTAA TACTTGGCAG ACCCAAGAAC
AGCACTAAAG ATATAGATAT CTTTATCGAT GAGAATAAAA GGCTTTTCGA ACTTATTAAA
AAACAGTTAA CAATTAGAGA AATAGCGAGA CTTACATACA AGTCTACCAC AACTGTTGTA
AAAGCGATTA AACTTTATAA GTTGCATCCT GAAAAGTTTT TATCGGCAAC TTAA
 
Protein sequence
MNRLVILARV STSKQDTERQ LSDLNEVCTR NQYDLVNTFT ETVSGKYGIT ERTTLQAIIK 
MAELKQFDKL LVSEVSRIGR KTSEVLKFIE ILTERKISIY IHNYGLETLD RNLNQNPLIG
MMINFLSSFS DMERTLTISR VKSGLEEARR RNVILGRPKN STKDIDIFID ENKRLFELIK
KQLTIREIAR LTYKSTTTVV KAIKLYKLHP EKFLSAT