Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2960 |
Symbol | |
ID | 4186345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3392683 |
End bp | 3393336 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638072947 |
Product | DNA resolvase |
Protein accession | YP_679544 |
Protein GI | 110639335 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000000168825 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000591562 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAATAGAT TAGTAATCTT AGCGAGGGTA TCAACGAGTA AACAAGACAC AGAACGTCAG TTGAGTGATT TAAATGAAGT TTGCACAAGA AATCAATACG ATTTAGTAAA TACTTTTACT GAAACAGTAA GCGGTAAATA TGGCATTACA GAGCGGACAA CTCTTCAAGC CATTATTAAA ATGGCAGAGT TGAAGCAATT TGATAAGCTT CTTGTATCAG AGGTTTCTCG TATTGGTAGG AAGACGAGTG AAGTTTTAAA ATTCATCGAG ATTTTAACTG AAAGAAAAAT TTCGATTTAT ATTCACAATT ATGGATTGGA AACATTAGAT AGAAATTTGA ATCAAAATCC ATTAATCGGC ATGATGATAA ATTTTCTATC TTCCTTTTCC GATATGGAGC GAACACTAAC TATCAGCCGT GTCAAAAGTG GTCTAGAAGA AGCTCGTAGA CGTAACGTAA TACTTGGCAG ACCCAAGAAC AGCACTAAAG ATATAGATAT CTTTATCGAT GAGAATAAAA GGCTTTTCGA ACTTATTAAA AAACAGTTAA CAATTAGAGA AATAGCGAGA CTTACATACA AGTCTACCAC AACTGTTGTA AAAGCGATTA AACTTTATAA GTTGCATCCT GAAAAGTTTT TATCGGCAAC TTAA
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Protein sequence | MNRLVILARV STSKQDTERQ LSDLNEVCTR NQYDLVNTFT ETVSGKYGIT ERTTLQAIIK MAELKQFDKL LVSEVSRIGR KTSEVLKFIE ILTERKISIY IHNYGLETLD RNLNQNPLIG MMINFLSSFS DMERTLTISR VKSGLEEARR RNVILGRPKN STKDIDIFID ENKRLFELIK KQLTIREIAR LTYKSTTTVV KAIKLYKLHP EKFLSAT
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