| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2948 |
|---|
| Symbol | |
|---|
| ID | 4185589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 3373410 |
|---|
| End bp | 3375995 |
|---|
| Gene Length | 2586 bp |
|---|
| Protein Length | 861 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 638072935 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_679532 |
|---|
| Protein GI | 110639323 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000754112 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000101752 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | GTGCTACTAA TGACTATGAT TCAATCAATA GAAGATGGAA GAAAAGAAGA CGGAAACCGT
TCAATTGCTG AAAAAATAAT TAAGAGACTG CATGATTTGG ACAAAACTGT TGAAAATAAT
CAAGGTCGTT GGGCATGGGA ACTTTTACAA AATGCTAAAG ACAGTATCGC AGATTTAGAA
CATAGAAAAG TTTCTATTCA AATTGAGCTT GATGAGGATA ACGTAGAATT TAGACACAAT
GGAGTTCATT TTACAGAACA AGATGTTAGA GGAGTAATAA ATCAAATAAC TTCGAAAGAA
ATTGAACAGG GCAAACAATC AAAAAAAACA GGACGATTTG GTACAGGTTT TCTAACAACT
CATCTTTTAT CACGAATCAT TCAAGTTAAA GGCGTTTTAG AAACTAAAAA TAAAGACTTT
TATAGTTTTG AATTTCCTTT AGACCGTGAA GGGAAAACTA CAACTCAATT AATTCCTAAA
ATTGAAAATG CATGGACTGA ATTTCACAAT TCAACTAAAC TAATAAATGG GCATTACAAT
GCTAATGATT TCAATACTTC TTTTTTATAT AAACTTAATT CTATCGAACA AAAGCGAATA
GCAAGAGTTG GTGTAGAAGA ATTTATCAAA CTAATACCTT TTGTTTTGTC ATTTATTCCA
AAAGTCCAAC AAGTCGATAT AATAGATAAT ACTTTATCAA GAAACATTAC TTTTGAAAAC
AATCAAAAAG AATCAAGTCA ATATGTTAAA GTCATTTCTC AGACCTTAAA TGGCATAAAG
TCAGAGATTC ATTTATTAGT CATTTCGGAT AATGATGTTT GTATAGGGTG CGAAATAGAA
AAAAATGAAA AGGGTTTTAG GATAAAAAGC TTAAAAGATA TCCCTAAAAT ATTTTGCGAT
TTTCCGCTTA TTGGGACAGA GCAATTTCAT TTTCCTGTTG TAATAAATAG TTTTTATTTT
AATCCCCAAA CTGAGAGGGA TGGTGTATGG CTAAAAGGAA CTGACGATGA TGAAGTTCAA
GAAAATAGAG AAATATTTGA GTCTGCGATT GAATTATTTA AAATACTTTT AAACGAAGTT
TCACATAAAC CCTTTTTTGA TTTATTTAAC ATTGTTGAAA CTAGGATTCC ATATACGAAT
GAAAAATATT TTGATGAATA CTGGTACAAA CAGAGTATTC AAAAACCTTT GAGAGAATCT
CTTATAGAAG CTAGATTGAT TGAGCTTGAA GACGAAAATT TGGAGAAGAT GCCTCTAAAA
AAAATATGGT TTCCTGCTAA ATCCTATTCT GAAAAAGTTC AAACAGAAAT ATGGAAATTT
ACTTATGACT TATTCCCTAA CTTAGTTCCT AAGAAAAGTC ATTCAATTTA TTGGTCTGAA
TCATCTTGGG AAGAATGGAA TAAGCTTACA TATGTTGTGC TCGCTTCAAC AGTTGCAACG
CAAGAAAATA TTGCTAAGTT AAGTGAAACA CTTAGACTTG AAAATAAGGA CACATATAAT
TGGTTAAATT CTTTTTCTGA CTTTCTTCTA GCTGAAGAAA GTAATCAAAT TTTATTTGAA
AAGCATCTTA TAACTCCAAA TCAAAAAGGA ATATTCAAAA AGAAATCCGA TTTATATATT
GATGAAATAG AAGACTCAAC CTTAATAAAT ATTTTAAAAC TACTTGGAGA AGATTGGATG
GATGAACTAT TAAGTAAAAA AGTGCTTTTT GGAAATTATG TTCCTAAAAC CAAAAAGAAT
ATTGCGTTAA GAATTACTGA AAAGTTAAAT GACAAAATTA AAAGTTCAAA TATTGTCGAA
GATAATTTTG TCAAAGCCAT AAGTCTTCTT TCGGAATGGT TTGAAAATAA TAAAGAGGTG
GGGAAAGAAC ATTTTTCAGA ATTATATAGA AGAAGAGCAG AATTATTTAT GAATACTATT
GAAGATAAAG ATAGTTTGTA TAAAGTAATG AGAAGTAAGA CTGATTTGGC TCAACTTTCA
AAAGTAGCTC AGGCAATAGA TTCCAATCCT CAATTGCTCA AAAATATCGA AAAAGCAGAA
GAACTCTCAA ATTTACTAAC GCAATTTAAT GTTAATGATA TTTCAGAATT AAAAAGGATG
TTGTTATTGG CTCAGGAAAG AAATGTGATT GATATAAAGT CTGAAATCAC AGAAGATGAT
TTAATAGGTC TTGGAGTGAC TTCAATTGAA GAGTTAGAAG TAGCCTTAAA GGATAAAAAT
TTATCCCTAA TGTTTACTCA TACTTCCACT CCTAATGTAG ACATGTTCCT ATCTGTTCAA
AAACTTATTT CAAGAGCCAA GGATAACATT ATTGACCATT TACAAACTTT ACCCGACTAT
GACTGTAGTG AATTAGAAGT ATTAGCTAAT ACTGTACTTG GGGGTATTAA AAAGGATGGT
TTATTAATCC ATATAGTAAT TAGACCTTCT GATAATGGAA AGGTAATTGT TTATTATAGC
TCTGAAAAAG ATACTTTAGA CTATGCGAAT GCTGAACTTT GGATTGATAA CGGAATTGAA
GTACCTAGAC ATTTAACATT GGGAAAAATT CTTAAAAATA CAGGGATTAA TAAAATACCA
GTTTAA
|
|---|
| Protein sequence | MLLMTMIQSI EDGRKEDGNR SIAEKIIKRL HDLDKTVENN QGRWAWELLQ NAKDSIADLE
HRKVSIQIEL DEDNVEFRHN GVHFTEQDVR GVINQITSKE IEQGKQSKKT GRFGTGFLTT
HLLSRIIQVK GVLETKNKDF YSFEFPLDRE GKTTTQLIPK IENAWTEFHN STKLINGHYN
ANDFNTSFLY KLNSIEQKRI ARVGVEEFIK LIPFVLSFIP KVQQVDIIDN TLSRNITFEN
NQKESSQYVK VISQTLNGIK SEIHLLVISD NDVCIGCEIE KNEKGFRIKS LKDIPKIFCD
FPLIGTEQFH FPVVINSFYF NPQTERDGVW LKGTDDDEVQ ENREIFESAI ELFKILLNEV
SHKPFFDLFN IVETRIPYTN EKYFDEYWYK QSIQKPLRES LIEARLIELE DENLEKMPLK
KIWFPAKSYS EKVQTEIWKF TYDLFPNLVP KKSHSIYWSE SSWEEWNKLT YVVLASTVAT
QENIAKLSET LRLENKDTYN WLNSFSDFLL AEESNQILFE KHLITPNQKG IFKKKSDLYI
DEIEDSTLIN ILKLLGEDWM DELLSKKVLF GNYVPKTKKN IALRITEKLN DKIKSSNIVE
DNFVKAISLL SEWFENNKEV GKEHFSELYR RRAELFMNTI EDKDSLYKVM RSKTDLAQLS
KVAQAIDSNP QLLKNIEKAE ELSNLLTQFN VNDISELKRM LLLAQERNVI DIKSEITEDD
LIGLGVTSIE ELEVALKDKN LSLMFTHTST PNVDMFLSVQ KLISRAKDNI IDHLQTLPDY
DCSELEVLAN TVLGGIKKDG LLIHIVIRPS DNGKVIVYYS SEKDTLDYAN AELWIDNGIE
VPRHLTLGKI LKNTGINKIP V
|
|---|
| |