Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2924 |
Symbol | |
ID | 4185623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3340823 |
End bp | 3344017 |
Gene Length | 3195 bp |
Protein Length | 1064 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638072911 |
Product | hypothetical protein |
Protein accession | YP_679508 |
Protein GI | 110639299 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000594804 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.19757 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGGA ATACAACATA TAGTATTTAT ACCTGCAGTA ATGCGTTACT GAACACGCTG AAAGTGTCTC TGCTTTTGGG TGCGCTGCTG TGCAGCCTGA CTGCGCAGGC ACAAACCAAA ACGGTTGAGC ACGATGTAGT CTTTGAAACC GATTCCATGC AATCGATGTG GGGGCCGGGC GAAGGATTTA ACATTAACCG CACGACAAAT TTTTTCGATC GTTTTGAAAG TTCGTATCCG TTTGATACGC GCCCGGGCTC CATCTTTTCT GTTGCCGGTT TTAAATTCGG TGCGGGTATC TGGGGCAGAT TTGCGTTTGG TATCGGCCCG CTGGCCTTTA AAGTAAGCGG TTTCGAAGGC GGCGGTGTTG GTGTCAAATA CCCCATCAAA ACCAGCCTCG TACTTCCGGA GGACTCTACG TTTAATGCCG GTGAAACCGT TACCATAAAG ACGGATTATA CCGTACAGGA AGATTTCGAA TTAAATACTG CATACCCGGC TACCGGCGAA GTGAGTCTGG ACATGCCGAT CATGTTTGAC ATGAAGGTTG GTATTGACGT CTGCTTGTTT GAATGTTTCA GCATCCGCAT CTTCCCGCCT GATTTTGCGG GCGATGCCAT TCCGGACCCG CTGGTTGATA TAAACTGGGT TATTCTTAAA GTGAATAAAG ATGAGATCAC CTACCCGTGT CTGAATATTC CGCCTGTATG CAGCATTGAC ATTCCGGAAG GCTCTACATC CGGTACCTTA CCCGCAAGTT CGCCGTTGAG TGGCAGCGTT AAAATTCCGC ATGTAGAAAC AACGGCATCA AAAGAAGGTA AAGACCTTGT GGCCAGCGGC GGTGACCCAT ACCTGATCCC AAGCCTGGAT ATCATTCAGC TGCTCAGCTT TGCGCCCCCG CCGATCGGTA CCTTTTTCGG TATCCTCAGT TCTGGCCTGC AGATTCCTCC CGGCGGCATC AGGGACTTTG GCGGTACACG GCGCTTTATC GGCTTAAACT GGACCTTGTT CACGATGAAC CTGAACATGC CCGTTTCACA ATCTCAGCAG TTCCGCTTCC ACCCTACCGT CAACCTCAAG CTGCGGCTGC CCGTGGATGT GCGGTATGTA TACACGGATA TAAAAGAAGG AAATATTGTT GAAGGAACGG ATTCCATCAT CGACGTACCG CTTGGTGCCG ATCTGAAGAT CCAGTATCCT TGCAACATGT CGCACATGGA TATGCATGCG AGTTATGTAA TCTCTACAAA TGAATTTTCC AACCGTACCT ACGACCACGT AGATGTTGAA CTGGTCTTTA CCGCATTTGA ATTTGGCATT GAATTTCCGG ATTTCGATAT TATTCCCCGC TTCTGCATCA GCATTCCGGT GGTAGGCGAT CTGTGTTTTC AGCTTACCGT ACCAGGCTTT GAAATCAGTA TCGGTCCGCT GGTACAGCCG CCGCCGGTGC ACCTGGCAGG CTTTGATCTT CCCGATTATG TAAACCGTAC CTGGGAACTG GAAGGTTTTT CAGAGCAATA TATTACGGAA CCCTTCCGGC TTGTACCAAG AAAAATTAAG ACAACTGTTG CCGTCAGTAA TGCCCTGTGC TTCGGTACAG CCACAGGCGG TGCTTCCTTT GATGTAACCG GCGTCACTGC ACCTGTCGCC TATCAGTGGT CTACAGGCAG TACATCTAAA GACCTGAGTG CCGCTCCGGC AGGAAGACAG TATGTTATTG CAACAGATGT AAATCAATGC CGGGTACATG CCGATGCGCT GATCAGTCAG CCGGATCCGA TCCGTACCGC AATCGCTGCC TCAAACCTGG TCTGCTATAA TGATTTTACC GGAACAGCTT CTGTTACGGC TTCCGGTGGT ATTCCTTCCT ATACCTATGC ATGGACAAAC GGACAAACAT CTGCTGCTCC AACAGGATTG CCGGCAGGCA AACACGTTGT TACCATAACA GATGCGAACG GATGTAAACA ATCCGATTCG GTTCTGCTTG CACAGCCACC GGACATCCGC GCAGTGATTC TGAATGCGGT AAACCCTACC TGTTTCGGAA AAGCAGACGG CTCTGTATCC CTGGATATAA GCGGCGGTGT GCAGCCGTAC TTTTATCAGT GGACCAATGG TGCATTCGAC AAGGATATAC GCCTGCTGTC CGGAGGAACC TATGCCGTAA ACATGCGGGA TGCAAACGGA TGTACGCGTG ATCTGAGCGC TACGCTGGTT GAACCTTCAC AGCTGCTGCC CACACTTTCA GTATTAAGCG ATGTGGCTTG CCTTGGTGGC AGGAATGGAA GCATCCTCGC TGATGTCAGC GGGGGAACAC AGCCGTACCG CTATACCTGG AAAAATGCAG ACCTGGAATT AAGTGCTGTT TCCAATCTTA TCAGCAGTCT GCCGGCAGGG GTTTATTCTC TGACTGTGCA GGATAAAAAT AATTGTACGG CAGACAGCTA CATTGAAATT ACAGCCCCGC AGTTTATACT GGAAAGCAGT GTAACCAAAA CAGACCTGAG CTGTGCCAAT GGTACGGATG GAACAGCGCA GGTAGCCGTA ACCGGCGGCA CCTCGCCTTA CCTGATCAGC TGGTCAAACG GTGCAAGCGG TACATCCGCT TCTGATCTTG CAGCCGGTAC CTATACAATC AATATACTGG ATTCTAAAGG ATGCGCAACG GTTAACAAAG CAGTGATTGC TTCTCCATCC GGCATGCTTG TTACAATTTC AGTGAAAGAC ATCTCCTGTG CAGATCAGCA GGACGGAGAA CTGCAGGCTG CGGTAACAAA AGGTACGCCG CCGTATACCT ATCTGTGGTC AAACGGTTCT GCCGAACCTT CCCTGAAAGA CCTTGCTGCC GGCATATATA CCCTTACGGT TACAGATAAA AAATCCTGTA CACATACCGC GGATGCTACG GTTGCCGCCG GAAACGGAGA TTGCCTCTTT ATTCCGGATG CCTTCTCTCC CAACAACGAC GGTGTAAATG ACCGCTGGGT ATTACGCAAC ATCCGGCTTT ATCCGAATAA CACCATGCAG GTATTCAATC AATGGGGACA GCAGTTATAC AGCGCGTCCC CGTATCTCGA ACCATGGGAC GGCAGGCACA ACGGTAACTT ATTGCCGCCG GCAACCTATT ATTATATTTT CAGCAAAGGT GATGGTTCTG CTTCTGTAAC GAGCCCGCTC ACTATTATAA AATAA
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Protein sequence | MKRNTTYSIY TCSNALLNTL KVSLLLGALL CSLTAQAQTK TVEHDVVFET DSMQSMWGPG EGFNINRTTN FFDRFESSYP FDTRPGSIFS VAGFKFGAGI WGRFAFGIGP LAFKVSGFEG GGVGVKYPIK TSLVLPEDST FNAGETVTIK TDYTVQEDFE LNTAYPATGE VSLDMPIMFD MKVGIDVCLF ECFSIRIFPP DFAGDAIPDP LVDINWVILK VNKDEITYPC LNIPPVCSID IPEGSTSGTL PASSPLSGSV KIPHVETTAS KEGKDLVASG GDPYLIPSLD IIQLLSFAPP PIGTFFGILS SGLQIPPGGI RDFGGTRRFI GLNWTLFTMN LNMPVSQSQQ FRFHPTVNLK LRLPVDVRYV YTDIKEGNIV EGTDSIIDVP LGADLKIQYP CNMSHMDMHA SYVISTNEFS NRTYDHVDVE LVFTAFEFGI EFPDFDIIPR FCISIPVVGD LCFQLTVPGF EISIGPLVQP PPVHLAGFDL PDYVNRTWEL EGFSEQYITE PFRLVPRKIK TTVAVSNALC FGTATGGASF DVTGVTAPVA YQWSTGSTSK DLSAAPAGRQ YVIATDVNQC RVHADALISQ PDPIRTAIAA SNLVCYNDFT GTASVTASGG IPSYTYAWTN GQTSAAPTGL PAGKHVVTIT DANGCKQSDS VLLAQPPDIR AVILNAVNPT CFGKADGSVS LDISGGVQPY FYQWTNGAFD KDIRLLSGGT YAVNMRDANG CTRDLSATLV EPSQLLPTLS VLSDVACLGG RNGSILADVS GGTQPYRYTW KNADLELSAV SNLISSLPAG VYSLTVQDKN NCTADSYIEI TAPQFILESS VTKTDLSCAN GTDGTAQVAV TGGTSPYLIS WSNGASGTSA SDLAAGTYTI NILDSKGCAT VNKAVIASPS GMLVTISVKD ISCADQQDGE LQAAVTKGTP PYTYLWSNGS AEPSLKDLAA GIYTLTVTDK KSCTHTADAT VAAGNGDCLF IPDAFSPNND GVNDRWVLRN IRLYPNNTMQ VFNQWGQQLY SASPYLEPWD GRHNGNLLPP ATYYYIFSKG DGSASVTSPL TIIK
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