Gene CHU_2924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2924 
Symbol 
ID4185623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3340823 
End bp3344017 
Gene Length3195 bp 
Protein Length1064 aa 
Translation table11 
GC content50% 
IMG OID638072911 
Producthypothetical protein 
Protein accessionYP_679508 
Protein GI110639299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000594804 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.19757 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGGA ATACAACATA TAGTATTTAT ACCTGCAGTA ATGCGTTACT GAACACGCTG 
AAAGTGTCTC TGCTTTTGGG TGCGCTGCTG TGCAGCCTGA CTGCGCAGGC ACAAACCAAA
ACGGTTGAGC ACGATGTAGT CTTTGAAACC GATTCCATGC AATCGATGTG GGGGCCGGGC
GAAGGATTTA ACATTAACCG CACGACAAAT TTTTTCGATC GTTTTGAAAG TTCGTATCCG
TTTGATACGC GCCCGGGCTC CATCTTTTCT GTTGCCGGTT TTAAATTCGG TGCGGGTATC
TGGGGCAGAT TTGCGTTTGG TATCGGCCCG CTGGCCTTTA AAGTAAGCGG TTTCGAAGGC
GGCGGTGTTG GTGTCAAATA CCCCATCAAA ACCAGCCTCG TACTTCCGGA GGACTCTACG
TTTAATGCCG GTGAAACCGT TACCATAAAG ACGGATTATA CCGTACAGGA AGATTTCGAA
TTAAATACTG CATACCCGGC TACCGGCGAA GTGAGTCTGG ACATGCCGAT CATGTTTGAC
ATGAAGGTTG GTATTGACGT CTGCTTGTTT GAATGTTTCA GCATCCGCAT CTTCCCGCCT
GATTTTGCGG GCGATGCCAT TCCGGACCCG CTGGTTGATA TAAACTGGGT TATTCTTAAA
GTGAATAAAG ATGAGATCAC CTACCCGTGT CTGAATATTC CGCCTGTATG CAGCATTGAC
ATTCCGGAAG GCTCTACATC CGGTACCTTA CCCGCAAGTT CGCCGTTGAG TGGCAGCGTT
AAAATTCCGC ATGTAGAAAC AACGGCATCA AAAGAAGGTA AAGACCTTGT GGCCAGCGGC
GGTGACCCAT ACCTGATCCC AAGCCTGGAT ATCATTCAGC TGCTCAGCTT TGCGCCCCCG
CCGATCGGTA CCTTTTTCGG TATCCTCAGT TCTGGCCTGC AGATTCCTCC CGGCGGCATC
AGGGACTTTG GCGGTACACG GCGCTTTATC GGCTTAAACT GGACCTTGTT CACGATGAAC
CTGAACATGC CCGTTTCACA ATCTCAGCAG TTCCGCTTCC ACCCTACCGT CAACCTCAAG
CTGCGGCTGC CCGTGGATGT GCGGTATGTA TACACGGATA TAAAAGAAGG AAATATTGTT
GAAGGAACGG ATTCCATCAT CGACGTACCG CTTGGTGCCG ATCTGAAGAT CCAGTATCCT
TGCAACATGT CGCACATGGA TATGCATGCG AGTTATGTAA TCTCTACAAA TGAATTTTCC
AACCGTACCT ACGACCACGT AGATGTTGAA CTGGTCTTTA CCGCATTTGA ATTTGGCATT
GAATTTCCGG ATTTCGATAT TATTCCCCGC TTCTGCATCA GCATTCCGGT GGTAGGCGAT
CTGTGTTTTC AGCTTACCGT ACCAGGCTTT GAAATCAGTA TCGGTCCGCT GGTACAGCCG
CCGCCGGTGC ACCTGGCAGG CTTTGATCTT CCCGATTATG TAAACCGTAC CTGGGAACTG
GAAGGTTTTT CAGAGCAATA TATTACGGAA CCCTTCCGGC TTGTACCAAG AAAAATTAAG
ACAACTGTTG CCGTCAGTAA TGCCCTGTGC TTCGGTACAG CCACAGGCGG TGCTTCCTTT
GATGTAACCG GCGTCACTGC ACCTGTCGCC TATCAGTGGT CTACAGGCAG TACATCTAAA
GACCTGAGTG CCGCTCCGGC AGGAAGACAG TATGTTATTG CAACAGATGT AAATCAATGC
CGGGTACATG CCGATGCGCT GATCAGTCAG CCGGATCCGA TCCGTACCGC AATCGCTGCC
TCAAACCTGG TCTGCTATAA TGATTTTACC GGAACAGCTT CTGTTACGGC TTCCGGTGGT
ATTCCTTCCT ATACCTATGC ATGGACAAAC GGACAAACAT CTGCTGCTCC AACAGGATTG
CCGGCAGGCA AACACGTTGT TACCATAACA GATGCGAACG GATGTAAACA ATCCGATTCG
GTTCTGCTTG CACAGCCACC GGACATCCGC GCAGTGATTC TGAATGCGGT AAACCCTACC
TGTTTCGGAA AAGCAGACGG CTCTGTATCC CTGGATATAA GCGGCGGTGT GCAGCCGTAC
TTTTATCAGT GGACCAATGG TGCATTCGAC AAGGATATAC GCCTGCTGTC CGGAGGAACC
TATGCCGTAA ACATGCGGGA TGCAAACGGA TGTACGCGTG ATCTGAGCGC TACGCTGGTT
GAACCTTCAC AGCTGCTGCC CACACTTTCA GTATTAAGCG ATGTGGCTTG CCTTGGTGGC
AGGAATGGAA GCATCCTCGC TGATGTCAGC GGGGGAACAC AGCCGTACCG CTATACCTGG
AAAAATGCAG ACCTGGAATT AAGTGCTGTT TCCAATCTTA TCAGCAGTCT GCCGGCAGGG
GTTTATTCTC TGACTGTGCA GGATAAAAAT AATTGTACGG CAGACAGCTA CATTGAAATT
ACAGCCCCGC AGTTTATACT GGAAAGCAGT GTAACCAAAA CAGACCTGAG CTGTGCCAAT
GGTACGGATG GAACAGCGCA GGTAGCCGTA ACCGGCGGCA CCTCGCCTTA CCTGATCAGC
TGGTCAAACG GTGCAAGCGG TACATCCGCT TCTGATCTTG CAGCCGGTAC CTATACAATC
AATATACTGG ATTCTAAAGG ATGCGCAACG GTTAACAAAG CAGTGATTGC TTCTCCATCC
GGCATGCTTG TTACAATTTC AGTGAAAGAC ATCTCCTGTG CAGATCAGCA GGACGGAGAA
CTGCAGGCTG CGGTAACAAA AGGTACGCCG CCGTATACCT ATCTGTGGTC AAACGGTTCT
GCCGAACCTT CCCTGAAAGA CCTTGCTGCC GGCATATATA CCCTTACGGT TACAGATAAA
AAATCCTGTA CACATACCGC GGATGCTACG GTTGCCGCCG GAAACGGAGA TTGCCTCTTT
ATTCCGGATG CCTTCTCTCC CAACAACGAC GGTGTAAATG ACCGCTGGGT ATTACGCAAC
ATCCGGCTTT ATCCGAATAA CACCATGCAG GTATTCAATC AATGGGGACA GCAGTTATAC
AGCGCGTCCC CGTATCTCGA ACCATGGGAC GGCAGGCACA ACGGTAACTT ATTGCCGCCG
GCAACCTATT ATTATATTTT CAGCAAAGGT GATGGTTCTG CTTCTGTAAC GAGCCCGCTC
ACTATTATAA AATAA
 
Protein sequence
MKRNTTYSIY TCSNALLNTL KVSLLLGALL CSLTAQAQTK TVEHDVVFET DSMQSMWGPG 
EGFNINRTTN FFDRFESSYP FDTRPGSIFS VAGFKFGAGI WGRFAFGIGP LAFKVSGFEG
GGVGVKYPIK TSLVLPEDST FNAGETVTIK TDYTVQEDFE LNTAYPATGE VSLDMPIMFD
MKVGIDVCLF ECFSIRIFPP DFAGDAIPDP LVDINWVILK VNKDEITYPC LNIPPVCSID
IPEGSTSGTL PASSPLSGSV KIPHVETTAS KEGKDLVASG GDPYLIPSLD IIQLLSFAPP
PIGTFFGILS SGLQIPPGGI RDFGGTRRFI GLNWTLFTMN LNMPVSQSQQ FRFHPTVNLK
LRLPVDVRYV YTDIKEGNIV EGTDSIIDVP LGADLKIQYP CNMSHMDMHA SYVISTNEFS
NRTYDHVDVE LVFTAFEFGI EFPDFDIIPR FCISIPVVGD LCFQLTVPGF EISIGPLVQP
PPVHLAGFDL PDYVNRTWEL EGFSEQYITE PFRLVPRKIK TTVAVSNALC FGTATGGASF
DVTGVTAPVA YQWSTGSTSK DLSAAPAGRQ YVIATDVNQC RVHADALISQ PDPIRTAIAA
SNLVCYNDFT GTASVTASGG IPSYTYAWTN GQTSAAPTGL PAGKHVVTIT DANGCKQSDS
VLLAQPPDIR AVILNAVNPT CFGKADGSVS LDISGGVQPY FYQWTNGAFD KDIRLLSGGT
YAVNMRDANG CTRDLSATLV EPSQLLPTLS VLSDVACLGG RNGSILADVS GGTQPYRYTW
KNADLELSAV SNLISSLPAG VYSLTVQDKN NCTADSYIEI TAPQFILESS VTKTDLSCAN
GTDGTAQVAV TGGTSPYLIS WSNGASGTSA SDLAAGTYTI NILDSKGCAT VNKAVIASPS
GMLVTISVKD ISCADQQDGE LQAAVTKGTP PYTYLWSNGS AEPSLKDLAA GIYTLTVTDK
KSCTHTADAT VAAGNGDCLF IPDAFSPNND GVNDRWVLRN IRLYPNNTMQ VFNQWGQQLY
SASPYLEPWD GRHNGNLLPP ATYYYIFSKG DGSASVTSPL TIIK