| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2897 |
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| Symbol | |
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| ID | 4185069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 3316444 |
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| End bp | 3321171 |
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| Gene Length | 4728 bp |
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| Protein Length | 1575 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638072886 |
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| Product | hypothetical protein |
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| Protein accession | YP_679485 |
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| Protein GI | 110639276 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0255386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.161029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTATA CTTCTGGTAA AATCATTTTT AAACTCTTGG CATGCTTCTT ATTCATTGAT
TGTCTAAATC AAACTTTTAC CGCTATGAAA AACATTCTTC ATACTCTTAT TATTTTAGTG
CTTTCAACAG CCTGCATTCA ATCTGCATTT GCTACAGGCG AACCTGCAAC AAAGTTCAAT
ATTTTCATTC CACCAAATAA CGATAGCAAT CATAGAGATG TCTGTTTGAT CGTAACAGCT
ATTTACGATA GTACTATATT TCAGATTATA GATGATGGAA TGGATGGCGA TACAGATGAC
TCTAAGGCAG GTATGTTAAT GGCAGGACAA TCTTATATTT TATATATCCG AGATAATGGC
ATTAACGATG ATAACCCAAG CGCAAGTAAT GGAATAAAAA AACAGGATGG TGATTATTTT
ATTATAACAG CGAACAATTT AATTCTTGCA TCTCAATCAA CCGATTCTGA TTGGCAACAC
GATTGGGTAC CTTCAATCAG TGGAACAGGT TTGGGTACAA AATTTATTAT CTACGCACCC
AAAATCAGTT CGTCACAACG CGATGTAAAT GTAATGGCAT ATGAAGATTC CACAATGATC
ACAATCAGGC GCATCTCAAA TACACCAACA ACAACTTCCG GAACAACGAA TGTTGATATG
TTCACTTCAA CTGTAGTTGC GCAAAGATTA ATTAATAAAG GACAAGATAT TATTTATTAT
TCCAAAGAAG GGCGTGATCT ACTGGTAAGC GGCCATACCT ATGTAATTGA ATCAAACAAA
CCGGTTACAA CTCAGTACGG AGCACTTTTT GGTAATGAGC GTGATGGTGG CGGATATGTG
CCTTCATCTA ATGGCAGCTG CTCGGGAGAT CTTTTTTATT TTACTGTTCC GTACCAAGTA
ACTACTGAGC AGGAAATTCG AATCGTATCC TGGAGCGACA ATAATGCTGT TATTCTGGAA
CGATATGTAA ATGGAACCTG GATCAATGTC AAAAATTTTA ATCCGTTAAA CTATATGAAG
TCTGGTGAAT GGATTGGTAA AACAAATGGC CAAACATATG CAACAGTATT CAGAGTTAGT
TGTTCTCCCG GTAAAAAAGT TTCTGTTTTT GAAGCCAATT GGATGGAAAC CGGCTCCGTA
GGAACTTCTG ACATTGCAAC AATGGCTTCT GCGGAAAACG GGAAAGCTTC AGGGAAAAAG
TTTTTGGTTT ATATGGCTCC TCCAGGATAT GAACAGAATG TATTAGACCC ATTTACCAAT
AAAAAACTTA CGCAAAATAC CCATGCATAT TTATTTGCCA ATTCAAATGA AGCAACTGTT
GTGACAGTGA AAGATGCATA TACAAACGGA ACCCATTTTT CAAAAACATT TACAATTGCA
GCTGGCAGAT ACGCAGATTG TTCTTTAACT CTTACGGAAT GGAAAAACAT TTATAACGGA
ACCGGAACAA CTGCAGCAGG TGCAGAAAGA CCCTATTTAA TTATTGAATC GACCGAAGAG
GTTGCTGTGA TGGTTACTAA TTTTAATGAT AATTGGATGA TGTATTTCGG TTCTTCTCAA
GTAAAAGGAT TTAGTCAAAC AGGTAGTACT TCAACACCTA AAACAATTCC AGGAAATGAA
GTTCAAATAA CTAATAACTT AATTATTGAA TCAAACACAA CAAATGCATC CGTTGAAATA
GTTGTTGGCT CTGGTTTAAT ACCCGTCTCT TCTCAATTGA TTAATACAAC TACTTCATCT
AGTATTACCG GAACTATTAC TACAACCAAT GACAATAGCT CAATTACATT TGCTACCATT
CCAGTAATGA ATACTACAGA TACATATGTA ATACATACCA CTGTTATTCC GGCATTAGTA
TATAACGATG GGAATTCTAT TCCGGATATG ACCGTATTAA GTGTTGAAAC AGTTTTAACA
GGAACTGTAA ACGGCGAAAC ACAACAGTCA ATCTCTTCAA CAGGAATAAC CGATAATTCC
GCCAACACAA GTAATTTTAT TTTTAGTAAA ATGACTACGG GGATTTTATC AACCGATAAA
ACTACATCCT GGACTTCTAA TTGGGTGGAC GCTGATGGAG ATGGAGACGA TGACCTATTT
GTAACAGAAA ATACAAAAGC CATACAAAAC ATTTTATACA TTAATAATGG AAATAGAACG
TTTACAAAAA GGAATTCCGG AATATTTACA TCATCCTCCG ACCGTGCAGC ATCTATTTCT
TCATCCTGGG CAGATACAGA TAATGATGGA GATATAGATT TTGTTGTTGC AAACAATGGC
AACCCAACAA ACTTTTTATA TACAAATAAT GGAAATGGTA GCTTCAGCCG CATAAATAAC
TCTGCCATCA ATTCAACAGT GGGTTATTAT CATGGAGTTT CTTTTGCCGA TTATGACAAC
GATGGCTTTG TCGATCTATT TATGACAGAT TATATGCCTA CACGTTTCAA TCGTTTATTT
CATAACAATG GAGATGGCAC ATTTACTGAA ATACTAAACT CTCCTATTGT TGCTGAAGCC
AGTTATAGTA TTACGGGAAG TTGGGCTGAT TATGACAAAG ATGGAGATCA GGATTTATTT
GTTGTAAACG ACAAAGGCTT TTCAAATACG TTATATCAAA ATAAAGGAAA TGGAATATTT
GAGAAAGTAA ATTCTATTGT ATCATCTGAC AATGGATTTT CTGTATCTGC ATGTTGGGGA
GATTATGATA ACGACAATGA TTTAGATCTG TATGTTACAA ATTCAAATTC AGATGCATTC
CTATACAATA ATGCAGGAGA TGGCACATTC ACTAAAATCA CAAACTCAAT AATTACAAAG
ACCGGAAATG GTGCTACTCA TGGTACAAAC TGGGTAGACA TTGACAAAGA TGGAGATCTT
GATCTATACT TTGTTGCAAA TAATAAAACA AAGGCACTCT ACATAAACAA CGGTAATGGT
GTATTCACTA AAAAGATTAC CGAACTACTG AACTCAAGTA AAGGAAGCTG TTACGGTCAT
ACTTGGTCGG ATTTTGATAA AGACGGAGAC ATGGATGTAT TTGTAACCAC GTTGAATAAC
GAAACAAATA CATTGTATAC AAATAATGGA AACAGTAATA AATGGATCGA AGCAAAATTA
ACAGGTACAG CTTCAAATAA AAGTGCTATA GGTGGGCGCA TTGAAGTATT TGCTAGAATT
CATGGTACAC CTATCTGGCA AATGCGCGAA ATAAATGCAC AATCCGGATT GGGAGGACAA
AATTCATTAA CACAACATTT TGGACTAGCA GATGCAGGAA TTATTGATAG CATGATCATC
TATTGGCCAT CTGGTTTTAT TCAACGACTA AGTGATATAC CAAGTAACCA AATACTTTCT
ATCACTGAAC CTAACAGTAG TATCTTAAAA GGAATTGTAT TCAATGATCT AAATCACAAT
TGTATTTACG ATAGCGGAGA AGAAATCGTA TCAGGAAAAA AAGTATTGAT TCAACCAGGT
AATATATATT GTGCCACTAA TAACTCAGGT ATATATGAAG TGCATGTCCC AACTGGAACA
TATACTGTTA GTCTGGTTGC CGATACATAT TGGAGATCTA CCTGTTCAAC ATCAACAACT
ACTATTACAC AAATTGGACA AATCATCACT GCAGGTCCAA TAGCAGCAAG ATCAAATGGC
AATCAACGCC AAGATATGGG AATAACAATT TCACCAACAA GTTTGCGTCG TGGATTTAAA
AATCAATTGA AAATTCAATA CTCAAATTCA GGAAATTTAA CGTCTGTAAA AGATACCATT
CGAATGATTG TTCCAAATGA TATTTTCATA CTTCAGTCTT CTATCCCATG GAATAACATT
TCAAATGGAA ATGAATATCA ATGGTATATT GATCCAATGG AAGCAGGTGA TACGCAAGCT
ATATTTTTAA TAGATTCCGT TTCCGTATAT GCACCTTTGG ATGCATTCAG AACATTTGAT
GTTTCGATTT CAAATTATTC ACAAGAAGAA AATTTATTGA ACAATTCACA GCTTAGTTCC
ATGAAGATTA TTGGTTCTTT CGACCCAAAT GATATGACTG TTTACCCTAT GGGAGAAGGC
ACTCAAGGTT ATGTTTCAAA AGGCACTACA TTAAATTATA CTATACATTT TGAAAACACA
GGAAATTACC CTGCTGACAA AGTCATTATT ACATGCATCC TTTCTGAACA CCTTGACAAG
TCAGCATTAT CTATTGAATC ATCTTCTCAT AGTATGTCTT ATGAAATTCA GAATAATATT
CTAACCTGCA CGTTTAACCA AATAAATCTT GTAGGCAATA AACAAGATTC CTTATTAGCC
CAAGGTTTTG TTCGCTTTTC AATTCCAATC AAAAACACCA GTGCTGCAGG AAGCAGTATC
ACAAACCAAG CCTATATTAT TTTCGATTTT AACCAACCTG TAGCAACAAA TATCGTTCGG
AATACAATAA AATTAAATTT GCCCAACGAT GCAGTAAGTC TTTATCCAAA CCCTGCAACA
ACACATGTTG TGGCAGCGTT AATAAGTGCA AAAGCACAAT ATGAATCAAT TTGTTATATA
ACATCATATA CCATAGAAAA TATGGACGGC AAAACAATTC GATCTATGGT AGATATTGAA
CAAAATGTAT TAGATATTGA TTTAACTGCT ATTAAAAATG GAATCTATCT GATCAAATTT
TACGATTCAA CTGGTCAATC TTATATAAAC AGGCTTATTG TTCAATAA
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| Protein sequence | MAYTSGKIIF KLLACFLFID CLNQTFTAMK NILHTLIILV LSTACIQSAF ATGEPATKFN
IFIPPNNDSN HRDVCLIVTA IYDSTIFQII DDGMDGDTDD SKAGMLMAGQ SYILYIRDNG
INDDNPSASN GIKKQDGDYF IITANNLILA SQSTDSDWQH DWVPSISGTG LGTKFIIYAP
KISSSQRDVN VMAYEDSTMI TIRRISNTPT TTSGTTNVDM FTSTVVAQRL INKGQDIIYY
SKEGRDLLVS GHTYVIESNK PVTTQYGALF GNERDGGGYV PSSNGSCSGD LFYFTVPYQV
TTEQEIRIVS WSDNNAVILE RYVNGTWINV KNFNPLNYMK SGEWIGKTNG QTYATVFRVS
CSPGKKVSVF EANWMETGSV GTSDIATMAS AENGKASGKK FLVYMAPPGY EQNVLDPFTN
KKLTQNTHAY LFANSNEATV VTVKDAYTNG THFSKTFTIA AGRYADCSLT LTEWKNIYNG
TGTTAAGAER PYLIIESTEE VAVMVTNFND NWMMYFGSSQ VKGFSQTGST STPKTIPGNE
VQITNNLIIE SNTTNASVEI VVGSGLIPVS SQLINTTTSS SITGTITTTN DNSSITFATI
PVMNTTDTYV IHTTVIPALV YNDGNSIPDM TVLSVETVLT GTVNGETQQS ISSTGITDNS
ANTSNFIFSK MTTGILSTDK TTSWTSNWVD ADGDGDDDLF VTENTKAIQN ILYINNGNRT
FTKRNSGIFT SSSDRAASIS SSWADTDNDG DIDFVVANNG NPTNFLYTNN GNGSFSRINN
SAINSTVGYY HGVSFADYDN DGFVDLFMTD YMPTRFNRLF HNNGDGTFTE ILNSPIVAEA
SYSITGSWAD YDKDGDQDLF VVNDKGFSNT LYQNKGNGIF EKVNSIVSSD NGFSVSACWG
DYDNDNDLDL YVTNSNSDAF LYNNAGDGTF TKITNSIITK TGNGATHGTN WVDIDKDGDL
DLYFVANNKT KALYINNGNG VFTKKITELL NSSKGSCYGH TWSDFDKDGD MDVFVTTLNN
ETNTLYTNNG NSNKWIEAKL TGTASNKSAI GGRIEVFARI HGTPIWQMRE INAQSGLGGQ
NSLTQHFGLA DAGIIDSMII YWPSGFIQRL SDIPSNQILS ITEPNSSILK GIVFNDLNHN
CIYDSGEEIV SGKKVLIQPG NIYCATNNSG IYEVHVPTGT YTVSLVADTY WRSTCSTSTT
TITQIGQIIT AGPIAARSNG NQRQDMGITI SPTSLRRGFK NQLKIQYSNS GNLTSVKDTI
RMIVPNDIFI LQSSIPWNNI SNGNEYQWYI DPMEAGDTQA IFLIDSVSVY APLDAFRTFD
VSISNYSQEE NLLNNSQLSS MKIIGSFDPN DMTVYPMGEG TQGYVSKGTT LNYTIHFENT
GNYPADKVII TCILSEHLDK SALSIESSSH SMSYEIQNNI LTCTFNQINL VGNKQDSLLA
QGFVRFSIPI KNTSAAGSSI TNQAYIIFDF NQPVATNIVR NTIKLNLPND AVSLYPNPAT
THVVAALISA KAQYESICYI TSYTIENMDG KTIRSMVDIE QNVLDIDLTA IKNGIYLIKF
YDSTGQSYIN RLIVQ
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