| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2888 |
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| Symbol | rfe |
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| ID | 4184479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3302727 |
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| End bp | 3303869 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638072878 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_679477 |
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| Protein GI | 110639268 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
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| TIGRFAM ID | [TIGR02380] undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000019692 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0658114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAATA TTCTATTTCA GTACGCAGAT TTGTTGTTAG CATACATATT GTCATTTGCT
TCAGCATTTA TAGCTATACC GATTGTTATC AAACAATCTA AAAAGAATAA TCTTCTTGAT
AAACCAGATT TCAGGAAACA GCATAAAGAG CCAATACCAA CGATGGGAGG AGTAGGAATC
TTTGCAGGTC TAATTGTATC AGGATTTATA TGGATTGATT TACTTTCTGT TCGTGAGTCT
ATAGGTATTT CTGTTGCAAT TTCAATGTTG CTTGTAACGG GTATCGTAGA TGACATAAAA
GGTCTTTCAG CAGTATTCCG TTTGGGAATT CAATGTATAG GAGGTGTATT GGCTATTCAG
GCCGGACTGG TAATTCACTT ACCATCTATT TTTCAATTCA GTGTAGAAAC GATGATGATC
ATTGAATACG GGGTTACCAT ATTTTTAATT GCAGGTGTAA CAAATGCATT TAATTTAATT
GATGGTATTG ATGGCTTGGC TGGTGGATTG GGATTTATAA ATGCAAGCAT GTTTGGTTTC
TTATTCCTAT ATTTTGGAAA TACTGGCTTT GCAGTTTTGT CATTCTCTTT TGCTGCAGCC
TTACTGGCTT TTTTAAAATA CAATTTCAAT CCAGCCAGAA TCTTTATGGG TGATACCGGT
TCATTGGTAT TAGGTTACCT CATGATTGTA TTTGCTATCA AAGTATTTAA TCTTTCTTAT
GCGCATACCC ATTCAAATAC CTTTATACTT CTCGTATTCT CAATTGTTTT AGTGCCTGTT
ATTGATACTG CCAGAGTGTT TCTATTTCGT ATTCTGAAAG GTAAATCGCC TTTCTCTGCT
GATCGTTCTC ACATTCATCA TTTGCTTTTA AAAACCGGGT TTAACCATAA GAAAGCTTCT
TTGATTTTAT GTTTTGCAAA TATCGTATTG ATTGTTGAAG CTTATTTATT GAGAAATGTA
GATATACCAC TGGCAATTTT ACTACTAATT GTATCAGCAA TATTTTTAAT CGAAATTATT
TCTATTAAAC GATTATTTAA AATAAGAACC ACTGTTCATA TACTATACAA TGAGTATAAG
AAAGGGAGTG CAGACAATCA GCTTTTGTTA AAATATTTAA ATGAGAAGAA AAAATATGAA
TGA
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| Protein sequence | MENILFQYAD LLLAYILSFA SAFIAIPIVI KQSKKNNLLD KPDFRKQHKE PIPTMGGVGI
FAGLIVSGFI WIDLLSVRES IGISVAISML LVTGIVDDIK GLSAVFRLGI QCIGGVLAIQ
AGLVIHLPSI FQFSVETMMI IEYGVTIFLI AGVTNAFNLI DGIDGLAGGL GFINASMFGF
LFLYFGNTGF AVLSFSFAAA LLAFLKYNFN PARIFMGDTG SLVLGYLMIV FAIKVFNLSY
AHTHSNTFIL LVFSIVLVPV IDTARVFLFR ILKGKSPFSA DRSHIHHLLL KTGFNHKKAS
LILCFANIVL IVEAYLLRNV DIPLAILLLI VSAIFLIEII SIKRLFKIRT TVHILYNEYK
KGSADNQLLL KYLNEKKKYE
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