| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2884 |
|---|
| Symbol | wcaL |
|---|
| ID | 4184475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 3297460 |
|---|
| End bp | 3298572 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638072874 |
|---|
| Product | a-glycosyltransferase |
|---|
| Protein accession | YP_679473 |
|---|
| Protein GI | 110639264 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0290347 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0642732 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACATCA TTCACTTAGT GTTAGGTAAA GCAAATCCGG ATAGGATGAA TGGAGTCAAC
AAGGTAGTTG ACAATTTAGC TAAAGAACAA ACCGTTCTTG GTTATCGAGT TAGTGTTTGG
GGTATTACCC CGGATCCGAA GGATAAAACA ACTGAAAGAA CCTATGATCT AAATTTATTT
CAGGCAAAGA GAAATAAATT GATTCTAGAT GCAGAAATCA AAAAGGCTAT CGAAGAATGT
CCTAAAGACA CCGTGTTTCA CATACACGGT GGTTTTATTC CTGAATTTTA TCATTTTACA
AAACTACTGA ATAAACATGG ATTGGATTTC ATACTAACCC CTCATGGAAA TTATGCTGCA
AATGCGCTTA GAAAAAATGG TTTATTGAAA TGCATTTACT TCAATTTATT TGAAAAAAAT
ATGCTTTCAA CCTGCAAAGC TATTCATTGT TTAGGTGAAA GAGAAAAGAA TGACATTGAC
AAAGTACATG CATTATCAAA AAAACTGCTT ATTCCTAACG GCCAACGCAT GGAAGACATT
CCTAAAATGC TTTCTAGAAC AGAAAGTAGT ATTCCTGTTT TTGGCTATTG CGGACGCATT
ACTCGTGATC AAAAAGGATT GGACTTGTTA ATTGAAGGTT TTAAAAAATA CAAAGATCAA
AATGGAACAG GACAACTAAA ATTGATAGGA AATGGAGAAT ATTTGAATGA ATTAACTAAA
TATGTCAGAA AAAATAATTT AATTGATGTT GTACTTTTTC TTGGTGTTCG TTATGGAGAT
GACAAATTTA ATGAAATCGC TGCTATGGAT GCATTTTATC ATCCCTCACG CAACGAAGGA
CTTCCCACAG CAGTACTAGA AGCTGCAGCA ACGGGAATTC CATGTGTTGT AAGTTCTTTC
ACGAACATGG GAGAAACAAT TGAAAAAAGC AATGCAGGTA TCTTTTTAAA AAAAAATACT
CCAGATGAAA TCTGTACCTC CATGTTTCAA ATTGAATTAT GGAAAAAAGA AAATAAAATC
AGACTGATTG GTCAAAACGC CGTTAACATG ATTAAGCTAA ACTTTGACTG GAACACCATT
GCTCAAAAAC TTATTAAAGT TTATGAAGAA TAA
|
|---|
| Protein sequence | MHIIHLVLGK ANPDRMNGVN KVVDNLAKEQ TVLGYRVSVW GITPDPKDKT TERTYDLNLF
QAKRNKLILD AEIKKAIEEC PKDTVFHIHG GFIPEFYHFT KLLNKHGLDF ILTPHGNYAA
NALRKNGLLK CIYFNLFEKN MLSTCKAIHC LGEREKNDID KVHALSKKLL IPNGQRMEDI
PKMLSRTESS IPVFGYCGRI TRDQKGLDLL IEGFKKYKDQ NGTGQLKLIG NGEYLNELTK
YVRKNNLIDV VLFLGVRYGD DKFNEIAAMD AFYHPSRNEG LPTAVLEAAA TGIPCVVSSF
TNMGETIEKS NAGIFLKKNT PDEICTSMFQ IELWKKENKI RLIGQNAVNM IKLNFDWNTI
AQKLIKVYEE
|
|---|
| |