Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2883 |
Symbol | wzxC |
ID | 4184474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3296223 |
End bp | 3297488 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638072873 |
Product | export protein |
Protein accession | YP_679472 |
Protein GI | 110639263 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0116967 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0630159 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT ATATTCCATT ACTTCGCATG CACAGTACTA AGGGATTTGC CTTAGCAGAT CAAGCTGTTG TTAGTGGAGG TAATTTTTTA ACATCCATTC TATATACAAG ATTATTAGGA TTGGAATCAT ATGGTACATT TATATTATGC TGGATGATTG TTTTATTTAT CTCTGGCTTA CAGCAGGCTT TCATTTTAAG CCCTATGACA ACGATATATG CTTACAAAAC AATTCAGGAT AAAATTAAGC TGTACTTGCA TACCTTACTT TCTATGCAAA TTATATTTAG CTTAGCTTGT TCAATATTTG TTCTGCTTGC ATTGCAGCTT AATAAGTTAT TTATACAGTC TACATATTTT AAAGACTTAA CATTCATATT ACCTGCTTCC ATATTTGCTT TTATAATGCA TGATTTTTTC AGAAGATATT TTATGCTTAT GGGAAAATCT TTCATCACCT TACTTTTAGA CGTATTATCT ACTTTACTAC TTTTATTTCT TTTGTATACA AACATCATCG TAGAGATAAA AGATGTATTT AAAATAATAG CATTCAGCTA TGTAATTCCA GCGACAATTG GGTATTTTTC ATCTGGCATG AAAATTGGTT TTCCATTGAT CAAATACAGC GTTAAAGCCC ACTGGATTCA GGGAAAATGG CTAATGGCAA CATCAGTGCT GCAATTATTC TCAGGAAATT ATTTTATCAT ATTAGCAGCA GGAATTTTAG GTACAGCTGA AATCGGAATC ATTCGCATTG CTCAAAATAT AGTTGGTATA TTGAATGTTT TATTCATTGC AATGGAATCT TATATCCCAA TATCTGCTTC CAAAATATTT CACAATTTAG GAATGGAAGC ATTGATCCAT TACTTAAAAA GAATGGCGTT ACAAGGGGTC ATAATAACTT CTTTTATCTG TATACTTTTA GCTTTATTCA CGCAGGATTT AATAAAAATA TTATATAGCA ATGACTTTAT TCAGTACACA CCTATTGTGC AAATTTATGC TTTATTCTAT ATACTCGTTT TTATTTCATT ACCACTCAGA TTCGCAATCA AAACCATTGA ACAAAATCAC CACATATTAA TTGGATATGC AATCAGCACA CTATTCAGTT TATTAACAGC AAGATTTTTT ATTGTTGAGT TTGGTATATA CGGCGTTCTA TCAGGAATTA TTATTACACA GTTATTGACA CAACTTTATT ATATATACGC ACTTAAAAAA TACAATCATG CACATCATTC ACTTAGTGTT AGGTAA
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Protein sequence | MKKYIPLLRM HSTKGFALAD QAVVSGGNFL TSILYTRLLG LESYGTFILC WMIVLFISGL QQAFILSPMT TIYAYKTIQD KIKLYLHTLL SMQIIFSLAC SIFVLLALQL NKLFIQSTYF KDLTFILPAS IFAFIMHDFF RRYFMLMGKS FITLLLDVLS TLLLLFLLYT NIIVEIKDVF KIIAFSYVIP ATIGYFSSGM KIGFPLIKYS VKAHWIQGKW LMATSVLQLF SGNYFIILAA GILGTAEIGI IRIAQNIVGI LNVLFIAMES YIPISASKIF HNLGMEALIH YLKRMALQGV IITSFICILL ALFTQDLIKI LYSNDFIQYT PIVQIYALFY ILVFISLPLR FAIKTIEQNH HILIGYAIST LFSLLTARFF IVEFGIYGVL SGIIITQLLT QLYYIYALKK YNHAHHSLSV R
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