Gene CHU_2883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2883 
SymbolwzxC 
ID4184474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3296223 
End bp3297488 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content30% 
IMG OID638072873 
Productexport protein 
Protein accessionYP_679472 
Protein GI110639263 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0116967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0630159 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT ATATTCCATT ACTTCGCATG CACAGTACTA AGGGATTTGC CTTAGCAGAT 
CAAGCTGTTG TTAGTGGAGG TAATTTTTTA ACATCCATTC TATATACAAG ATTATTAGGA
TTGGAATCAT ATGGTACATT TATATTATGC TGGATGATTG TTTTATTTAT CTCTGGCTTA
CAGCAGGCTT TCATTTTAAG CCCTATGACA ACGATATATG CTTACAAAAC AATTCAGGAT
AAAATTAAGC TGTACTTGCA TACCTTACTT TCTATGCAAA TTATATTTAG CTTAGCTTGT
TCAATATTTG TTCTGCTTGC ATTGCAGCTT AATAAGTTAT TTATACAGTC TACATATTTT
AAAGACTTAA CATTCATATT ACCTGCTTCC ATATTTGCTT TTATAATGCA TGATTTTTTC
AGAAGATATT TTATGCTTAT GGGAAAATCT TTCATCACCT TACTTTTAGA CGTATTATCT
ACTTTACTAC TTTTATTTCT TTTGTATACA AACATCATCG TAGAGATAAA AGATGTATTT
AAAATAATAG CATTCAGCTA TGTAATTCCA GCGACAATTG GGTATTTTTC ATCTGGCATG
AAAATTGGTT TTCCATTGAT CAAATACAGC GTTAAAGCCC ACTGGATTCA GGGAAAATGG
CTAATGGCAA CATCAGTGCT GCAATTATTC TCAGGAAATT ATTTTATCAT ATTAGCAGCA
GGAATTTTAG GTACAGCTGA AATCGGAATC ATTCGCATTG CTCAAAATAT AGTTGGTATA
TTGAATGTTT TATTCATTGC AATGGAATCT TATATCCCAA TATCTGCTTC CAAAATATTT
CACAATTTAG GAATGGAAGC ATTGATCCAT TACTTAAAAA GAATGGCGTT ACAAGGGGTC
ATAATAACTT CTTTTATCTG TATACTTTTA GCTTTATTCA CGCAGGATTT AATAAAAATA
TTATATAGCA ATGACTTTAT TCAGTACACA CCTATTGTGC AAATTTATGC TTTATTCTAT
ATACTCGTTT TTATTTCATT ACCACTCAGA TTCGCAATCA AAACCATTGA ACAAAATCAC
CACATATTAA TTGGATATGC AATCAGCACA CTATTCAGTT TATTAACAGC AAGATTTTTT
ATTGTTGAGT TTGGTATATA CGGCGTTCTA TCAGGAATTA TTATTACACA GTTATTGACA
CAACTTTATT ATATATACGC ACTTAAAAAA TACAATCATG CACATCATTC ACTTAGTGTT
AGGTAA
 
Protein sequence
MKKYIPLLRM HSTKGFALAD QAVVSGGNFL TSILYTRLLG LESYGTFILC WMIVLFISGL 
QQAFILSPMT TIYAYKTIQD KIKLYLHTLL SMQIIFSLAC SIFVLLALQL NKLFIQSTYF
KDLTFILPAS IFAFIMHDFF RRYFMLMGKS FITLLLDVLS TLLLLFLLYT NIIVEIKDVF
KIIAFSYVIP ATIGYFSSGM KIGFPLIKYS VKAHWIQGKW LMATSVLQLF SGNYFIILAA
GILGTAEIGI IRIAQNIVGI LNVLFIAMES YIPISASKIF HNLGMEALIH YLKRMALQGV
IITSFICILL ALFTQDLIKI LYSNDFIQYT PIVQIYALFY ILVFISLPLR FAIKTIEQNH
HILIGYAIST LFSLLTARFF IVEFGIYGVL SGIIITQLLT QLYYIYALKK YNHAHHSLSV
R