| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2877 |
|---|
| Symbol | |
|---|
| ID | 4184468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 3289340 |
|---|
| End bp | 3290353 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638072867 |
|---|
| Product | luciferase-like monooxygenase family protein |
|---|
| Protein accession | YP_679466 |
|---|
| Protein GI | 110639257 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.819855 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000897888 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTAAACTCGG CATTCTGGAT CAATCGGTTG TTCAGAAAAA TAAATCACCG
AAAGATGCGG TTGATGAAAC AGTTGATACC GTGAAACTTG CAGAGCAGTT GGGGTATTCC
CGCTTTTGGG TTTCAGAACA CCACAACTCT ACCTTTATTG CGGGTTCAAC GCCGGAAATT
TTAATGGTGA AGCTGGCCGA AGTTACGGAT CACATTCGCA TTGGCTCAGG CGGCATTATG
CTTCCTAACC ACAGTGCCTT AAAAGTGGCG GAGAATTTTC GCATGTTAGA AACACTTTTC
CCCGGGCGCA TTGATCTGGG AATGGGCAGA GCACCGGGTA CAGACAGACT CACATCCTCT
TTATTAAATC CTTCAAATGA TTTTGCTGAA GAAAGTTATT TACGCCAGCT GGATCATTTA
CAAAACTTTT TTTCAGATAC GGCTTATACC AGAGATAACC GGAGAATACT TGCCGTACCG
CAGTGCGAAA CAGTTCCGGA TCAATGGATC TTAAGCTCAA GCGGAGGAAG CAGCCTGATT
GCTGCACGCT TTGGCCTTGG GCTTGTGGTT GCAAAATTTA TTAATGGATT TGCCACACGG
GAAGTGATTG ATACGTATAA AAAGAATTTC AAACCATCGG AATATTTTCC GTTGCCCAAA
GCCATGTTAT CTATTTTTGT ATTGTGTGCA GAAACAGATA CAAAAGTTAA GGAGATGCGT
AAGTTTATGG ATTATATTTT TATTCAATTT GAAAAAGGCA ATTTTCATGA TTTCGGAGAC
TATGAAACCA TACAGAAGTA TGTGTTTACA CAGGAAGAAT TAGAGCGCAT TAACTACAAT
AGCGGAAGAA TTATTTCAGG TACTCCGGCA TCGGTTAAAC AGCAGCTGGA AAAGCTGGCA
GCTGAATTTG ATGTAGATGA AATTATTATT TCTACCATGG CCGGAAATGC TGCCGACCGG
AAACGCTCGT TTGAACTGAT TGCACAGGCA TTTGAATTGA CACCTGCAAA TTAA
|
|---|
| Protein sequence | MKKIKLGILD QSVVQKNKSP KDAVDETVDT VKLAEQLGYS RFWVSEHHNS TFIAGSTPEI
LMVKLAEVTD HIRIGSGGIM LPNHSALKVA ENFRMLETLF PGRIDLGMGR APGTDRLTSS
LLNPSNDFAE ESYLRQLDHL QNFFSDTAYT RDNRRILAVP QCETVPDQWI LSSSGGSSLI
AARFGLGLVV AKFINGFATR EVIDTYKKNF KPSEYFPLPK AMLSIFVLCA ETDTKVKEMR
KFMDYIFIQF EKGNFHDFGD YETIQKYVFT QEELERINYN SGRIISGTPA SVKQQLEKLA
AEFDVDEIII STMAGNAADR KRSFELIAQA FELTPAN
|
|---|
| |