Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2874 |
Symbol | |
ID | 4184465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3287225 |
End bp | 3287908 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638072864 |
Product | hypothetical protein |
Protein accession | YP_679463 |
Protein GI | 110639254 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.203099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0005762 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATCCAT CTTTTTTTCA GCTTGGGGTT TATTTTTCTA TTGAAAAATT ACAACAGGAT CTTCTTTTTT GTGAACGGGA AGTTTGGCCG GCACATTTTA ATGCGCAGCA TTACACAGGC AACTGGAGCA GCATTGCACT GCGGTCGGGT TCTGGAATTA CTACTGATAT CAACTCCTTT CCGGATCAGA CATACAAAAA CACACCACTG CTTGATGCCT GTTTTTATTT TCAGGAAGTC ATCGGTTGGT TTCGTTGTGA TAAGCAGGCC ATTCGGCTGC TACGACTAGA TCCGCTGAGC GAGATCAAAG AGCACACAGA TAACGATACT TCGTATGAAG ATGGTTTTTT CAGAATTCAT ATTACGGTTT ATACCAATTC AAACGTGCTG TTTTATCTGA ATAATGAACG TGTACCAATG AGTGCGGGAG AATGCTGGTA TGCAAATTTT CAGCTTCCGC ATTTTGTAAT CAATAACAGC GAACAGCCTC GGGTGCATTT GGTACTGGAC TGTATCCGCA ATGATTGGTC CGATGAGATC TTCAGCGCTG CAGGTTTTGA TCTGACATGT TTATCACAAG AAAAAAAAAT GTCAAGAGAA ACAAAACAAC AGATTATTGA GGAGCTTTTA CGAAATCCAA CAGAAATAAA TATCAAACTT GCCGCTTCTT TACAGAAACA GTAA
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Protein sequence | MNPSFFQLGV YFSIEKLQQD LLFCEREVWP AHFNAQHYTG NWSSIALRSG SGITTDINSF PDQTYKNTPL LDACFYFQEV IGWFRCDKQA IRLLRLDPLS EIKEHTDNDT SYEDGFFRIH ITVYTNSNVL FYLNNERVPM SAGECWYANF QLPHFVINNS EQPRVHLVLD CIRNDWSDEI FSAAGFDLTC LSQEKKMSRE TKQQIIEELL RNPTEINIKL AASLQKQ
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