Gene CHU_2874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2874 
Symbol 
ID4184465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3287225 
End bp3287908 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content40% 
IMG OID638072864 
Producthypothetical protein 
Protein accessionYP_679463 
Protein GI110639254 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.203099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0005762 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCCAT CTTTTTTTCA GCTTGGGGTT TATTTTTCTA TTGAAAAATT ACAACAGGAT 
CTTCTTTTTT GTGAACGGGA AGTTTGGCCG GCACATTTTA ATGCGCAGCA TTACACAGGC
AACTGGAGCA GCATTGCACT GCGGTCGGGT TCTGGAATTA CTACTGATAT CAACTCCTTT
CCGGATCAGA CATACAAAAA CACACCACTG CTTGATGCCT GTTTTTATTT TCAGGAAGTC
ATCGGTTGGT TTCGTTGTGA TAAGCAGGCC ATTCGGCTGC TACGACTAGA TCCGCTGAGC
GAGATCAAAG AGCACACAGA TAACGATACT TCGTATGAAG ATGGTTTTTT CAGAATTCAT
ATTACGGTTT ATACCAATTC AAACGTGCTG TTTTATCTGA ATAATGAACG TGTACCAATG
AGTGCGGGAG AATGCTGGTA TGCAAATTTT CAGCTTCCGC ATTTTGTAAT CAATAACAGC
GAACAGCCTC GGGTGCATTT GGTACTGGAC TGTATCCGCA ATGATTGGTC CGATGAGATC
TTCAGCGCTG CAGGTTTTGA TCTGACATGT TTATCACAAG AAAAAAAAAT GTCAAGAGAA
ACAAAACAAC AGATTATTGA GGAGCTTTTA CGAAATCCAA CAGAAATAAA TATCAAACTT
GCCGCTTCTT TACAGAAACA GTAA
 
Protein sequence
MNPSFFQLGV YFSIEKLQQD LLFCEREVWP AHFNAQHYTG NWSSIALRSG SGITTDINSF 
PDQTYKNTPL LDACFYFQEV IGWFRCDKQA IRLLRLDPLS EIKEHTDNDT SYEDGFFRIH
ITVYTNSNVL FYLNNERVPM SAGECWYANF QLPHFVINNS EQPRVHLVLD CIRNDWSDEI
FSAAGFDLTC LSQEKKMSRE TKQQIIEELL RNPTEINIKL AASLQKQ