Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2872 |
Symbol | |
ID | 4183728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3285561 |
End bp | 3286100 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638072862 |
Product | microcystin dependent |
Protein accession | YP_679461 |
Protein GI | 110639252 |
COG category | [S] Function unknown |
COG ID | [COG4675] Microcystin-dependent protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000497886 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATGAGT ATTTAGCAAT TATTAAAATT TTTGGCGGCA ATTTTGCACC CCGCGGATGG GCATTATGTC AGGGACAAAT TTTAAGCATC GCACAGAACA CCGCATTATT TTCACTGATC GGAACTACGT ATGGCGGCAA TGGACAAACA ACTTTTGCAT TGCCTGATCT GAGAGGCCGT GCACCAATCG GCTGGGGACA AGGTCCGGGT CTTTCTGCGT ATAACATTGG CCAGGTATCA GGTACCGAAA CCGTATCTAT TTTATTAAAT AACATGCCTG CGCACAATCA CGCTATTGGC GGTACAGTAC AGTTACCCGT AAACGATAGC AATGCTGATG CAGACGGTCC TATCGGGGCT TATTTGGGTA CACCAGGCAC AGCTATTTAC AGTTCAACAA CAAATGCTGT AGCTGCAAAT CTGAATACAA ATCTTACAAC TGCTGTTGTA GGGAGTAATA ACCCATTGGG CATTTTACAA CCGGTTTTAG CAGTGAGTTA TATCATTTGT ACACAAGGAA TTTTCCCTTC CAGAAACTAA
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Protein sequence | MDEYLAIIKI FGGNFAPRGW ALCQGQILSI AQNTALFSLI GTTYGGNGQT TFALPDLRGR APIGWGQGPG LSAYNIGQVS GTETVSILLN NMPAHNHAIG GTVQLPVNDS NADADGPIGA YLGTPGTAIY SSTTNAVAAN LNTNLTTAVV GSNNPLGILQ PVLAVSYIIC TQGIFPSRN
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