| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2863 |
|---|
| Symbol | fabF |
|---|
| ID | 4183720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 3271955 |
|---|
| End bp | 3273202 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638072854 |
|---|
| Product | 3-oxoacyl-[acyl-carrier-protein] synthase |
|---|
| Protein accession | YP_679453 |
|---|
| Protein GI | 110639244 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0132875 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00789188 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAC GAGTTGTTGT AACAGGAATA GGCGCATTGA CACCTATCGG TAATAATACA
GAAAGTTTCT GGAATTCCTT AATCAGCGGA ACAAGCGGAG CTGCACCGAT CACAAAATTT
GATGCTTCTA AATTTAAAAC ACGGTTTGCC TGTGAGCTGA AAAACTTTGA TCCGGTAAAT
TTTATGGAAA AAAGTGAAGC AAGAAAATAC GATTTGTTCA CGCAGTATGC ATTGATTGCA
GTTGAAGAAG CTGTACAACA TGCTCAGATC AATTTTGAAA CATTAAACAG AAACCGTATT
GGTGTAATCT GGGGAAGCGG CAATGGAGGG ATTGGTACGT TTCAGGAACA GGTAACGGAA
TTTGTAAAAG GAGATGGTAC GCCACGTTTC AATCCATTCT TCATTCCTAA AATGATCCTG
GATATTGCTG CCGGTGTTAT CTCCATTAAA TATGGTTTAC GCGGGGCAAA CTTTGCTACG
GTATCAGCCT GCGCCACATC CAACACGGCT ATTATTGAAG CATTCAATCA CATACGCTGG
GGTAAAGCAG ATATGATTAT TACAGGTGGT TCTGAAGCGC CGATCAATGA AGTTTCGGTA
GGCGGCTTTA ATGCGTCGCG TGCTTTATCT ACATTAAATG AAAATCCGTC TATCGCATCC
CGTCCGTTTG ATACAAACCG CGATGGATTT GTAATGGGCG AAGGAGCTGG TGCGCTTATT
CTTGAAAGTT ATGAAAGTGC CGTGAAACGT AATGCTCCTA TATTAGCTGA AGTTGTAGGT
GGCGGTATGG CAGCCGATGC GTATCACTTA ACGGGTACAC ATCCGGAAGG GGAAGGGGCA
TATCTTGGGA TGCTGGAAGC TCTGGCGGAA GCAAACATTA GCGCGGCTGA CATTGATTAT
GTAAACGCAC ACGCAACGTC TACCCCGCAA GGAGATATCA GTGAAATGAA AGCGATTGAA
CGTGTATTCG GTGCTTCAAC AAAATTACAT GTAAGTGCTA CCAAATCTAT GACAGGCCAT
TTGCTGGGCG CAGCCGGTGC GGTAGAAGCT ATTGCATGTA TCAAAGCTGT TCAGCACAAT
ATTATTCCGC CTACTATCAA CACCATGGAG ATTGATGCGG CTATTAATCC GTCGTTTCAG
TTTACGTTAG GGGAAGCGCA TCATAAAACG GTTCATTATG CCATGAGTAA TACGTTTGGC
TTCGGCGGAC ATATTGCTAC TGCGATCTTT AAAAAATATG AAGAATAA
|
|---|
| Protein sequence | MIKRVVVTGI GALTPIGNNT ESFWNSLISG TSGAAPITKF DASKFKTRFA CELKNFDPVN
FMEKSEARKY DLFTQYALIA VEEAVQHAQI NFETLNRNRI GVIWGSGNGG IGTFQEQVTE
FVKGDGTPRF NPFFIPKMIL DIAAGVISIK YGLRGANFAT VSACATSNTA IIEAFNHIRW
GKADMIITGG SEAPINEVSV GGFNASRALS TLNENPSIAS RPFDTNRDGF VMGEGAGALI
LESYESAVKR NAPILAEVVG GGMAADAYHL TGTHPEGEGA YLGMLEALAE ANISAADIDY
VNAHATSTPQ GDISEMKAIE RVFGASTKLH VSATKSMTGH LLGAAGAVEA IACIKAVQHN
IIPPTINTME IDAAINPSFQ FTLGEAHHKT VHYAMSNTFG FGGHIATAIF KKYEE
|
|---|
| |