| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2861 |
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| Symbol | |
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| ID | 4183718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 3269767 |
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| End bp | 3271092 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638072852 |
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| Product | outer membrane protein |
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| Protein accession | YP_679451 |
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| Protein GI | 110639242 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000652148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00782832 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGTTAAAG CAGGCAATTC TAAAGACACC ACGAATACGG CATTGGTAAA GTGGCGGGAA
TATTTTACCG ACCCGACGCT GATCAGTCTT ATTGATACAG CACTGCATAA TAACCAGGAG
CTGAACATTA CCTTATACGA AATCAATGTT GCACAGGCGG AAGTACGCGC ACGTAAAGGG
ATGTACTTAC CCAATGTATC TGTTGGTGCC GGAGCAGGTG CTGAAAAAGT TGGCCGCTAT
ACGCGCTTTG GTGCCGTGGA TCAAACAACA GACATCGAAC CTGGCAAACG GATTCCGGAA
GTGTTACCCG ATTATCAGAT CGGCCTGAAT GCTTCGTGGG AAGTAGATAT CTGGAAAAAA
CTCCGCAATG CAAAACAAGC GGCCGTGTAT AAATACCTTG CTTCTATTGA AGGAAAGAAT
TTCATGGTTA CAAACCTGGT TGCAGAAATT GCCAGCAACT ATTTTGAATT ACTGGCATTG
GATAATCAAC TTGACATCTT AAAAAAGAAC ATTGACATTC AAAACAATGC GCTTAAAATA
GTAAAGATGG AAAAGCAATC TGCTAAAGTT ACAGAGCTTG CTGTACGCAG GTTTGAAGCA
CAGGTGTATT ATACACAGAG TCTTCAGTTT GATATTCAGC AAAAAATTAT TGAAAAGGAA
AACAGAATCA ATTTTCTTGT TGGAAGATAC CCAACACCAA TCAAACGTAA TGCTGAATCG
TTCATCAATA TTATACCGGA TACGATATAT AAAGGTGTAC CTCCGCAATT GCTTCAAAAC
CGTGCGGATA TTAAAAGAGC TGAAAATGAC CTGGCAGCAG CAAAGCTGAA TGTAAAAGTT
GCGAAAGCGA ATTTCTATCC AACGTTGCGC CTTACAGGCG GTATCGGATA TGAAGCATTC
AATCCAAAGT TTATCATCAG CAGCCCGGAA TCCATGATGT TTTCATTAGC CGGAACATTG
GTTACACCAT TGATCAACAG AAATGAAATA AAGGCTATAT ACATTGGTGC AAATGCAAAG
CAGATTCAGG CTGTTTACAA TTACGAACGT ACCATTCTGA ATGCATACAT CGAAGTTGTG
AATCAGCTTG CAAAAATAGA CAATCTTGGC AAAAGCTATG ATCTGAAGTT CCTTCAGGTG
CAGGCACTGA ACGAATCTGT TACCATTTCA AACGGATTGT TTACTTCTGC CAGAGCAGAT
TACATGGAAG TATTGCTGAC ACAACGCGAT GCACTTGAAT CTAAAATGGA ATTGATTGAA
ACTAAAAAAG AGCAGATAAA TGCTATGGTA TATTTCTACC GTGCATTAGG CGGTGGATGG
AGATAA
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| Protein sequence | MVKAGNSKDT TNTALVKWRE YFTDPTLISL IDTALHNNQE LNITLYEINV AQAEVRARKG
MYLPNVSVGA GAGAEKVGRY TRFGAVDQTT DIEPGKRIPE VLPDYQIGLN ASWEVDIWKK
LRNAKQAAVY KYLASIEGKN FMVTNLVAEI ASNYFELLAL DNQLDILKKN IDIQNNALKI
VKMEKQSAKV TELAVRRFEA QVYYTQSLQF DIQQKIIEKE NRINFLVGRY PTPIKRNAES
FINIIPDTIY KGVPPQLLQN RADIKRAEND LAAAKLNVKV AKANFYPTLR LTGGIGYEAF
NPKFIISSPE SMMFSLAGTL VTPLINRNEI KAIYIGANAK QIQAVYNYER TILNAYIEVV
NQLAKIDNLG KSYDLKFLQV QALNESVTIS NGLFTSARAD YMEVLLTQRD ALESKMELIE
TKKEQINAMV YFYRALGGGW R
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