Gene CHU_2854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2854 
Symbol 
ID4183711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3259933 
End bp3260268 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content46% 
IMG OID638072845 
Producttranslation initiation factor 1 (eIF-1/SUI1) 
Protein accessionYP_679444 
Protein GI110639235 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.339586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0877983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA AGGAGCACAA AGGCAGGTCC GGGGTGGTAT ATTCAACCAG TGAGGAGTTC 
AATTATTCGT ACGAAGGGGA GACCGAACCG GAAACCTTAC CAGCGGATAA GCAGAAGTTA
AAAGTTTTGT TAGACAGCAA AGGCCGGGCA GGCAAAACCG TTACGGTTGT TTCCGGATTT
GTTGGCCAAA CGGCTGATCT GGAAGATCTA GGCAAAAAAT TGAAAAATAA GCTGGGCGTA
GGTGGTTCTG TAAAAGATGG TGAAGTGCTG ATTCAGGGCG ATTTCAGAGC ACGGCTGGTG
CCTTTATTGA ATGAGATGGG ATATAAGGTA AAGTAA
 
Protein sequence
MAKKEHKGRS GVVYSTSEEF NYSYEGETEP ETLPADKQKL KVLLDSKGRA GKTVTVVSGF 
VGQTADLEDL GKKLKNKLGV GGSVKDGEVL IQGDFRARLV PLLNEMGYKV K