| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2845 |
|---|
| Symbol | kdsB |
|---|
| ID | 4183411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 3247684 |
|---|
| End bp | 3248436 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638072836 |
|---|
| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
|---|
| Protein accession | YP_679435 |
|---|
| Protein GI | 110639226 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
|---|
| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.892224 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGTA ACATCTCTAT TGTAGCAATC ATTCCGGCGC GCTACGCCTC TACCCGTTTT
CCGGGAAAGC CTTTGATACA GATCAACGGC AAAACAATGA TCCAATGTGT GTACGATCAG
GTGCGCAGCA CACCTGAAAT TACCGAAGTA CTTGTTGCTA CCGACGACGA CCGCATTGAA
GCCGAAGTGC TGCGGTTTGG CGGTAAGGTT GTACGTACGC TACCCGAACA CCCAAGCGGC
ACCGACCGTT GTTTTGAAGC CTATCAGAAA TTGAATAAGC CTTTTGATTT CATCATCAAT
GTACAGGGTG ACGAACCTTT TATTCAGCCG GAACAGATCC GGACACTGGC AGGCATTTTA
ACGCCGGATG TAGAGCTTGC AACGCTGATT AAAAAAATCG AAGACGAAGA AACATTATTC
AATCCGAATA CGCCTAAGGT ATTGGTGAAT GCAAACGGTG AAGCAATCTA CTTCAGCCGG
CAGACGATTC CGTATCTGCG TCAGCATGCG GATAAAAAAG ACTGGCTGGC CAACCATACG
TTTTTCAAAC ACATCGGCAT GTATGCATAC CGTCCGGATA TATTGGCACA GATCACTCAG
TTAAAACCGT CTGCACTGGA GCTTGCGGAA TCGCTTGAGC AGTTGAGATG GTTAGAGAGC
GGCTATTCGA TCCACACGGC TGTTACTACG ATAGAGACTG TTGGTATTGA TACACCGGAG
GATTTATTGA GAGTGACTCA TACATCCAGC TAA
|
|---|
| Protein sequence | MSSNISIVAI IPARYASTRF PGKPLIQING KTMIQCVYDQ VRSTPEITEV LVATDDDRIE
AEVLRFGGKV VRTLPEHPSG TDRCFEAYQK LNKPFDFIIN VQGDEPFIQP EQIRTLAGIL
TPDVELATLI KKIEDEETLF NPNTPKVLVN ANGEAIYFSR QTIPYLRQHA DKKDWLANHT
FFKHIGMYAY RPDILAQITQ LKPSALELAE SLEQLRWLES GYSIHTAVTT IETVGIDTPE
DLLRVTHTSS
|
|---|
| |