Gene CHU_2839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2839 
Symbol 
ID4183405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3240794 
End bp3241522 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content37% 
IMG OID638072830 
Producthypothetical protein 
Protein accessionYP_679429 
Protein GI110639220 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.991999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACTC ACATCGGATG TTCGGGATAT AATTACAGGG AATGGAAAGG GATGTTCTAT 
CCGGAAGGCT TGCCGCAAAG CAAGTGGCTT GAATACTATT GTCGGCATTA TAATACCGTT
GAGATAAATG CAAGTTTTTA TAGATTTCCG ACGGGTAAAT CATTGAAAAC CTGGTACGAC
AAAACACCCG CTGATTTTAG ATTTTCCCTA AAGGCAAACA ATCAGATTAC GCATTACAAA
AAATTTAACG GTACACAATC CTTGATTTCC GAATTGTATG AGGTTGCAGC AGCAGGATTA
AAAGATAAAC TCGAATGCAT CCTATTTCAA TTACCGCCAA GTGTTAAGTA TACGCCTGAA
ATTCTGGAAC GAATTGTATC TCAATTAGAC CCGGCATTTA AAAATGTACT GGAGTTTCGT
GATGCAGGCT GGTGGAATAA CGAAGTATAT AAAGTTTTAC AATCAAAGAA TATTGTTTTT
TGTACATCCA GCTATCCGGG CTTGCCTGAA GATTTTATAA CAACGGCAGA TACCGCATAT
ATACGTATGC ACGGAAATAC GGAATTATAT AAATCAAATT ATTCTGACAA TCAATTACAG
CAACTCCGTA ACGATCTTAT TGATTCAGAT GTAAAAGAAG CCTTTGTTTA CTTTGATAAT
ACATGGGGCG GTAATGCGAT CGCGAATGCA AAAACAATGG AAAAATTAAT GCAATTAAAA
CATACATAG
 
Protein sequence
MRTHIGCSGY NYREWKGMFY PEGLPQSKWL EYYCRHYNTV EINASFYRFP TGKSLKTWYD 
KTPADFRFSL KANNQITHYK KFNGTQSLIS ELYEVAAAGL KDKLECILFQ LPPSVKYTPE
ILERIVSQLD PAFKNVLEFR DAGWWNNEVY KVLQSKNIVF CTSSYPGLPE DFITTADTAY
IRMHGNTELY KSNYSDNQLQ QLRNDLIDSD VKEAFVYFDN TWGGNAIANA KTMEKLMQLK
HT