Gene CHU_2838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2838 
Symbol 
ID4183404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3240012 
End bp3240791 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content40% 
IMG OID638072829 
Producthypothetical protein 
Protein accessionYP_679428 
Protein GI110639219 
COG category[S] Function unknown 
COG ID[COG1273] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02772] Ku protein, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA TCTGGACAGG TGCGATCGGG TTTGGTCTGG TAAACATACC CGTAAAATTA 
TTCAGTGCTA CACATGAGAG CAGACTTGAC CTGGATATGC TGGATAAAAA AGACCATTCC
AACATAAAAT TCCAGCGTGT GAATGCCAAG ACGGGCAAAG AAGTAGCATG GGATAATATT
GTTAAAGGAT ATAAGATAGA AGATGATTAC GTGATCCTTG ATGAAAAGGA TTTTGAAAAA
GCGAATGCGA AAAAAACGAA AACAATTGAA ATCCTGCAAT TCGTTCAGGA AGATGAAATT
GATTCCGTGT ATTTCGAAAC GCCGTATTAT ATTCAGCCCG ACAAATCGGG CACGCGCGCG
TATGCCTTGC TGCGTGAAGC ATTGATAAAA TCAAAGAAAG TAGCAGTAGC AAATTATGTA
CTTCGGAACA AAGAAGCACT GGCAATCCTG AAACCGGTCG GTAATGTTAT TGTATTAAAC
AAGATCCGTT TTCAGGAAGA AATCTTAGAT GCAGATGCAC TTGATCTTCC TGCTAAAAGT
GCAATCAAAG AAGGTGAAAT GAAAATGGCA CTTTCACTGA TTGATCAGCT GACGGAAACG
TTTGATATTT CTAAATACAA AGACACTTAT ACATCGGAAT TGTTGAAGCT GATTAAGGCA
AAAGCAAAAG GTACGGTTGT CAAAACAAAA TCAGCGGCTT CCAAACCTAC TGCAACCAAA
GATCTGATGG CACAGTTAAA AGCCAGTCTG CAGCCAACGA AAAGAGCAGC AGCACGATAA
 
Protein sequence
MKTIWTGAIG FGLVNIPVKL FSATHESRLD LDMLDKKDHS NIKFQRVNAK TGKEVAWDNI 
VKGYKIEDDY VILDEKDFEK ANAKKTKTIE ILQFVQEDEI DSVYFETPYY IQPDKSGTRA
YALLREALIK SKKVAVANYV LRNKEALAIL KPVGNVIVLN KIRFQEEILD ADALDLPAKS
AIKEGEMKMA LSLIDQLTET FDISKYKDTY TSELLKLIKA KAKGTVVKTK SAASKPTATK
DLMAQLKASL QPTKRAAAR