Gene CHU_2829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2829 
SymbolgatC 
ID4184193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3224857 
End bp3225144 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content36% 
IMG OID638072820 
Productaspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C 
Protein accessionYP_679419 
Protein GI110639210 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 
TIGRFAM ID[TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAG ATACTAAAAC AATTGGAAAG ATTGCGCACC TGGCGCGTCT TGAGTTTGAT 
GATAAATCAC TGGAAGCATT TTCAACAGAC TTCAATAAAA TTTTATCCTG GATCGATAAA
TTAAATGAAG TGAATACTGA TAATGTAGAG CCCTTGATTC ACATGAGTCA TGAATTGAAT
GTGCTGCGTG AAGACATCGA CAAAGTAACC ATCAGCCACG AAGAGGCATT AAAAAATGCG
CCTAAAAAAG ATTCAGATTA TTTCAGAGTT CCTAAATTCC TCTCATAG
 
Protein sequence
MSLDTKTIGK IAHLARLEFD DKSLEAFSTD FNKILSWIDK LNEVNTDNVE PLIHMSHELN 
VLREDIDKVT ISHEEALKNA PKKDSDYFRV PKFLS